bug#66118: closed ([PATCH] gnu: Add r-omixerrpm.)

[GNU bug Tracking System]

Your message dated Wed, 20 Sep 2023 12:31:45 +0000
with message-id <fa85906ccea44841a10b4b92d85aaf18@mdc-berlin.de>
and subject line Can not be added to Guix - The package contains a non-free 
binary
has caused the debbugs.gnu.org bug report #66118,
regarding [PATCH] gnu: Add r-omixerrpm.
to be marked as done.

(If you believe you have received this mail in error, please contact
help-debbugs@gnu.org.)


-- 
66118: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=66118
GNU Bug Tracking System
Contact help-debbugs@gnu.org with problems
> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: Add r-omixerrpm.
>
>
>
>
> Date: 
>
> Wed, 20 Sep 2023 10:39:12 +0000
>
>
>
>
> * gnu/packages/bioinformatics.scm (r-omixerrpm): New variable.
> ---
>  gnu/packages/bioinformatics.scm | 23 +++++++++++++++++++++++
>  1 file changed, 23 insertions(+)
>
> diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
> index 6acf37b312..d4da92b6b6 100644
> --- a/gnu/packages/bioinformatics.scm
> +++ b/gnu/packages/bioinformatics.scm
> @@ -15065,6 +15065,29 @@ (define-public r-dyngen
>  dynamic cellular processes at single-cell resolution.")
>      (license license:expat)))
>  
> +(define-public r-omixerrpm
> +  (let ((commit "184f1cc99aefed722e20eb00eda082348a064c4e")
> +        (revision "1"))
> +    (package
> +      (name "r-omixerrpm")
> +      (version (git-version "0.3.3" revision commit))
> +      (source (origin
> +                (method git-fetch)
> +                (uri (git-reference
> +                      (url "https://github.com/omixer/omixer-rpmR";)
> +                      (commit commit)))
> +                (file-name (git-file-name name version))
> +                (sha256
> +                 (base32
> +                  "10ipasg8zi4ln13a5zj2l4a35hd3sfy3p6gir0sw0vf3cbc11lnz"))))
> +      (properties `((upstream-name . "omixerRpm")))
> +      (build-system r-build-system)
> +      (home-page "https://github.com/omixer/omixer-rpmR";)
> +      (synopsis "Metabolic module profiling of microbiome samples")
> +      (description
> +       "An R interface for microbiome metabolic module profiling with 
> omixer-rpm.")
> +      (license license:gpl3))))
> +
>  ;; Needed for r-liana
>  (define-public r-omnipathr/devel
>    (let ((commit "679bb79e319af246a16968d27d64d8d6937a331a")
>
> base-commit: 6bd17a0806ad32d1493ac51a7443276f719c4224
> -- 
> 2.34.1
>
>
>
>
> --- End Message ---

--- Begin Message --- Subject: Can not be added to Guix - The package contains a non-free binary Date: Wed, 20 Sep 2023 12:31:45 +0000

Hello,

 

This package cannot be added to Guix because it contains a non-free binary. Therefore, please close the report.

 

Thank you,

Navid

 

- - 

Navid Afkhami

IT Administration

Max Delbrück Center for Molecular Medicine (MDC)

Berlin Institute for Medical Systems Biology (BIMSB)

Hannoversche Str. 28, 10115 Berlin

Phone: +49 30 9406 1316

Email:   navid.afkhami@mdc-berlin.de

 

smime.p7s
Description: S/MIME cryptographic signature

--- End Message ---