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[Getfem-commits] (no subject)


From: Yves Renard
Subject: [Getfem-commits] (no subject)
Date: Tue, 29 May 2018 09:04:12 -0400 (EDT)

branch: master
commit 8926cf6997e04ca6df631f922647dd12d25558a0
Author: Yves Renard <address@hidden>
Date:   Tue May 29 15:03:26 2018 +0200

    reverting a copy file error
---
 doc/sphinx/source/links.rst |  44 ++++++++++++----
 doc/sphinx/source/lists.rst | 123 +++-----------------------------------------
 2 files changed, 41 insertions(+), 126 deletions(-)

diff --git a/doc/sphinx/source/links.rst b/doc/sphinx/source/links.rst
index b232ea2..1280aa4 100644
--- a/doc/sphinx/source/links.rst
+++ b/doc/sphinx/source/links.rst
@@ -74,32 +74,54 @@ Some project using GetFEM++ and/or Gmm++
 * SimNIBS: |link7c|_.
 
 
-Some publications based on GetFEM++ and/or Gmm++
-------------------------------------------------
+Examples of publications based on GetFEM++
+------------------------------------------
 
 .. |link8| replace:: www3.interscience.wiley.com
 .. _link8: http://www3.interscience.wiley.com/journal/122440964/abstract
 
-    * Andreykiv A., Rixen D. J., Numerical modelling of electromechanical 
coupling using fictitious domain and level set methods. Int. J. Numer. Meth. 
Engng 2009. |link8|_.
+* Andreykiv A. and Rixen D.J., Numerical modelling of electromechanical 
coupling using fictitious domain and level set methods. Int. J. Numer. Meth. 
Engng 2009. |link8|_.
 
+.. |link8_1| replace:: hal.archives-ouvertes.fr
+.. _link8_1: https://hal.archives-ouvertes.fr/hal-01427872
 
-    * Mirko Windhoff, Alexander Opitz, and Axel Thielscher, Electric Field 
Calculations in Brain Stimulation Based on Finite Elements: An Optimized 
Processing Pipeline for the Generation and Usage of Accurate Individual Head 
Models. Human Brain Mapping, 2011. DOI: 10.1002/hbm.21479
+* Chouly F., Mlika R. and Renard Y.. An unbiased Nitsche's formulation of 
large deformation frictional contact and self-contact. Comp. Meth. Appl. Mech. 
Engng., 325:265--288, 2017. |link8_1|_.
 
-.. |link9| replace:: publications of Yves Renard
-.. _link9: http://math.univ-lyon1.fr/homes-www/renard/
+.. |link8_2| replace:: hal.archives-ouvertes.fr
+.. _link8_2: https://hal.archives-ouvertes.fr/hal-00960996/
+      
+* Fabre M., Pousin J. and Renard Y. A fictitious domain method for 
frictionless contact problems in elasticity using Nitsche's method. SMAI J. of 
Comput. Math., 2:19--50, 2016. |link8_2|_.
 
-    * |link9|_.
+.. |link8_3| replace:: hal.archives-ouvertes.fr
+.. _link8_3: https://hal.archives-ouvertes.fr/hal-00937569/
+  
+* Poulios K., Renard Y. An unconstrained integral approximation of large 
sliding frictional contact between deformable solids. Computers and Structures, 
153:75--90, 2015. |link8_3|_.
+      
+.. |link8_5| replace:: orbit.dtu.dk
+.. _link8_5: 
http://orbit.dtu.dk/ws/files/125153379/Postprint_Homogenization_of_long_fiber_reinforced_composites_including_fiber_bending_effects.pdf
+
+* Poulios K., Niordson C.F., Homogenization of long fiber reinforced 
composites including fiber bending effects, Journal of the Mechanics and 
Physics of Solids, 94, 433-452, 2016. |link8_5|_.
+
+.. |link10| replace:: sciencedirect.com
+.. _link10: https://www.sciencedirect.com/science/article/pii/S0950061818311292
+      
+* Lozinguez E., Barthélémy J.-F., Bouteiller V. and Desbois T., Contribution 
of Sacrificial Anode in reinforced concrete patch repair: Results of numerical 
simulations. Construction and Building Materials, 178 (2018) 405–417. |link10|_.
 
 .. |link11| replace:: link.springer.com
 .. _link11: http://link.springer.com/article/10.1007/s13137-016-0083-2
 
-    * E.V. Vtorushin, Application of mixed finite element to spatially 
non-local model of inelastic deformations. Int. J. Geomath. 2016 
+* Vtorushin E.V., Application of mixed finite element to spatially non-local 
model of inelastic deformations. Int. J. Geomath. 2016. |link11|_.
+
+.. |link12| replace:: onlinelibrary.wiley.com
+.. _link12: https://onlinelibrary.wiley.com/doi/abs/10.1002/hbm.21479
+      
+* Windhoff M., Opitz A., and Thielscher A., Electric Field Calculations in 
Brain Stimulation Based on Finite Elements: An Optimized Processing Pipeline 
for the Generation and Usage of Accurate Individual Head Models. Human Brain 
Mapping, 34(4), 923-35, 2013. DOI: 10.1002/hbm.21479. |link12|_.
 
 
 An evaluation of Gmm++ performance
 ----------------------------------
 
-.. |link10| replace:: Benchmark of C++ Libraries for Sparse Matrix Computation
-.. _link10: http://grh.mur.at/misc/sparselib_benchmark
+.. |linkalpha| replace:: Benchmark of C++ Libraries for Sparse Matrix 
Computation
+.. _linkalpha: http://grh.mur.at/misc/sparselib_benchmark
 
-|link10|_.
+|linkalpha|_.
diff --git a/doc/sphinx/source/lists.rst b/doc/sphinx/source/lists.rst
index 1280aa4..b8f7434 100644
--- a/doc/sphinx/source/lists.rst
+++ b/doc/sphinx/source/lists.rst
@@ -1,127 +1,20 @@
-.. include:: replaces.txt
 
-.. highlightlang:: none
+.. index:: mailing lists
 
-.. _links:
+.. _mailing-lists:
 
-*******************
-Some related links
-*******************
+GetFEM++ Mailing Lists
+======================
 
+GetFEM++ is maintened on the `Savannah <http://Savannah.gnu.org>`_ 
collaborative development platform for free software. See 
https://savannah.nongnu.org/projects/getfem for additional information on 
GetFEM++ development.
 
-Jean Garrigues courses (in french)
-----------------------------------
 
-.. |link1| replace:: http://jgarrigues.perso.egim-mrs.fr/ef.html
-.. _link1: http://jgarrigues.perso.egim-mrs.fr/ef.html
 
-|link1|_
+The mailing lists of GetFEM++ are listed on the page `getfem mailing lists 
<https://savannah.nongnu.org/mail/?group=getfem>`_ 
 
+The main mainling list is the `user one 
<https://lists.nongnu.org/mailman/listinfo/getfem-users>`_. All kind of 
problems or questions about using, install or improve GetFEM++ can be posted 
there. Don't forget to register to the list before to post a message.
 
 
-Internet Finite Element Resources
----------------------------------
+If you make contributions to Getfem, you should register to the 
`getfem-commits mailing list 
<https://lists.nongnu.org/mailman/listinfo/getfem-commits>`_.
 
-.. |link2| replace:: http://homepage.usask.ca/~ijm451/finite/fe_resources
-.. _link2: http://homepage.usask.ca/~ijm451/finite/fe_resources
 
-|link2|_
-
-
-MUMPS: a MUltifrontal Massively Parallel sparse direct Solver
--------------------------------------------------------------
-
-.. |link3| replace:: http://graal.ens-lyon.fr/MUMPS/
-.. _link3: http://graal.ens-lyon.fr/MUMPS/
-
-.. |link4| replace:: http://mumps.enseeiht.fr/
-.. _link4: http://mumps.enseeiht.fr/
-
-|link3|_ or |link4|_
-
-
-SuperLu: Sparse Gaussian Elimination on High Performance Computers
-------------------------------------------------------------------
-
-.. |link5| replace:: http://crd.lbl.gov/~xiaoye/SuperLU/
-.. _link5: http://crd.lbl.gov/~xiaoye/SuperLU/
-
-.. |link6| replace:: http://www.cs.berkeley.edu/~demmel/SuperLU.html
-.. _link6: http://www.cs.berkeley.edu/~demmel/SuperLU.html
-
-
-|link5|_ or |link6|_
-
-
-Some project using GetFEM++ and/or Gmm++
-----------------------------------------
-
-.. |link7| replace:: an open source model for glaciers
-.. _link7: http://icetools.sourceforge.net
-
-* IceTools: |link7|_.
-
-.. |link7b| replace:: A Problem Solving Environment for Electochemistry
-.. _link7b: 
http://www.echem.uni-tuebingen.de/~bs/echem/software/EChem++/echem++.shtml
-
-
-* EChem++: |link7b|_.
-
-
-.. |link7c| replace:: a software for the Simulation of Non-invasive Brain 
Stimulation
-.. _link7c: http://simnibs.de/
-
-* SimNIBS: |link7c|_.
-
-
-Examples of publications based on GetFEM++
-------------------------------------------
-
-.. |link8| replace:: www3.interscience.wiley.com
-.. _link8: http://www3.interscience.wiley.com/journal/122440964/abstract
-
-* Andreykiv A. and Rixen D.J., Numerical modelling of electromechanical 
coupling using fictitious domain and level set methods. Int. J. Numer. Meth. 
Engng 2009. |link8|_.
-
-.. |link8_1| replace:: hal.archives-ouvertes.fr
-.. _link8_1: https://hal.archives-ouvertes.fr/hal-01427872
-
-* Chouly F., Mlika R. and Renard Y.. An unbiased Nitsche's formulation of 
large deformation frictional contact and self-contact. Comp. Meth. Appl. Mech. 
Engng., 325:265--288, 2017. |link8_1|_.
-
-.. |link8_2| replace:: hal.archives-ouvertes.fr
-.. _link8_2: https://hal.archives-ouvertes.fr/hal-00960996/
-      
-* Fabre M., Pousin J. and Renard Y. A fictitious domain method for 
frictionless contact problems in elasticity using Nitsche's method. SMAI J. of 
Comput. Math., 2:19--50, 2016. |link8_2|_.
-
-.. |link8_3| replace:: hal.archives-ouvertes.fr
-.. _link8_3: https://hal.archives-ouvertes.fr/hal-00937569/
-  
-* Poulios K., Renard Y. An unconstrained integral approximation of large 
sliding frictional contact between deformable solids. Computers and Structures, 
153:75--90, 2015. |link8_3|_.
-      
-.. |link8_5| replace:: orbit.dtu.dk
-.. _link8_5: 
http://orbit.dtu.dk/ws/files/125153379/Postprint_Homogenization_of_long_fiber_reinforced_composites_including_fiber_bending_effects.pdf
-
-* Poulios K., Niordson C.F., Homogenization of long fiber reinforced 
composites including fiber bending effects, Journal of the Mechanics and 
Physics of Solids, 94, 433-452, 2016. |link8_5|_.
-
-.. |link10| replace:: sciencedirect.com
-.. _link10: https://www.sciencedirect.com/science/article/pii/S0950061818311292
-      
-* Lozinguez E., Barthélémy J.-F., Bouteiller V. and Desbois T., Contribution 
of Sacrificial Anode in reinforced concrete patch repair: Results of numerical 
simulations. Construction and Building Materials, 178 (2018) 405–417. |link10|_.
-
-.. |link11| replace:: link.springer.com
-.. _link11: http://link.springer.com/article/10.1007/s13137-016-0083-2
-
-* Vtorushin E.V., Application of mixed finite element to spatially non-local 
model of inelastic deformations. Int. J. Geomath. 2016. |link11|_.
-
-.. |link12| replace:: onlinelibrary.wiley.com
-.. _link12: https://onlinelibrary.wiley.com/doi/abs/10.1002/hbm.21479
-      
-* Windhoff M., Opitz A., and Thielscher A., Electric Field Calculations in 
Brain Stimulation Based on Finite Elements: An Optimized Processing Pipeline 
for the Generation and Usage of Accurate Individual Head Models. Human Brain 
Mapping, 34(4), 923-35, 2013. DOI: 10.1002/hbm.21479. |link12|_.
-
-
-An evaluation of Gmm++ performance
-----------------------------------
-
-.. |linkalpha| replace:: Benchmark of C++ Libraries for Sparse Matrix 
Computation
-.. _linkalpha: http://grh.mur.at/misc/sparselib_benchmark
-
-|linkalpha|_.



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