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08/10: gnu: r-gostats: Move to (gnu packages bioconductor).
From: |
guix-commits |
Subject: |
08/10: gnu: r-gostats: Move to (gnu packages bioconductor). |
Date: |
Fri, 12 Mar 2021 08:53:11 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 2a9705768808ff8b76bf38a7ae9445b2c756ba46
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Mon Mar 8 18:58:01 2021 +0100
gnu: r-gostats: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-gostats): Move from here...
* gnu/packages/bioconductor.scm (r-gostats): ...to here.
---
gnu/packages/bioconductor.scm | 31 +++++++++++++++++++++++++++++++
gnu/packages/bioinformatics.scm | 31 -------------------------------
2 files changed, 31 insertions(+), 31 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index aa172c5..a4618ec 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1661,6 +1661,37 @@ exploration of the results.")
high-throughput sequencing experiments.")
(license license:artistic2.0)))
+(define-public r-gostats
+ (package
+ (name "r-gostats")
+ (version "2.56.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "GOstats" version))
+ (sha256
+ (base32
+ "18q8p0fv9fl2r6zjxknfjwqxr69dlyxy6c8amzn6c6dwjq1cxk6j"))))
+ (properties `((upstream-name . "GOstats")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-annotate" ,r-annotate)
+ ("r-annotationdbi" ,r-annotationdbi)
+ ("r-annotationforge" ,r-annotationforge)
+ ("r-biobase" ,r-biobase)
+ ("r-category" ,r-category)
+ ("r-go-db" ,r-go-db)
+ ("r-graph" ,r-graph)
+ ("r-rgraphviz" ,r-rgraphviz)
+ ("r-rbgl" ,r-rbgl)))
+ (home-page "https://bioconductor.org/packages/GOstats")
+ (synopsis "Tools for manipulating GO and microarrays")
+ (description
+ "This package provides a set of tools for interacting with GO and
+microarray data. A variety of basic manipulation tools for graphs, hypothesis
+testing and other simple calculations.")
+ (license license:artistic2.0)))
+
(define-public r-gseabase
(package
(name "r-gseabase")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index ae3a801..c4713fc 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7387,37 +7387,6 @@ includes software to
")
(license license:cc0))))
-(define-public r-gostats
- (package
- (name "r-gostats")
- (version "2.56.0")
- (source
- (origin
- (method url-fetch)
- (uri (bioconductor-uri "GOstats" version))
- (sha256
- (base32
- "18q8p0fv9fl2r6zjxknfjwqxr69dlyxy6c8amzn6c6dwjq1cxk6j"))))
- (properties `((upstream-name . "GOstats")))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-annotate" ,r-annotate)
- ("r-annotationdbi" ,r-annotationdbi)
- ("r-annotationforge" ,r-annotationforge)
- ("r-biobase" ,r-biobase)
- ("r-category" ,r-category)
- ("r-go-db" ,r-go-db)
- ("r-graph" ,r-graph)
- ("r-rgraphviz" ,r-rgraphviz)
- ("r-rbgl" ,r-rbgl)))
- (home-page "https://bioconductor.org/packages/GOstats")
- (synopsis "Tools for manipulating GO and microarrays")
- (description
- "This package provides a set of tools for interacting with GO and
-microarray data. A variety of basic manipulation tools for graphs, hypothesis
-testing and other simple calculations.")
- (license license:artistic2.0)))
-
(define-public r-shortread
(package
(name "r-shortread")
- branch master updated (323aec6 -> df6b3c2), guix-commits, 2021/03/12
- 01/10: gnu: r-genefilter: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 02/10: gnu: r-deseq2: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 03/10: gnu: r-dexseq: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 04/10: gnu: r-annotationforge: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 05/10: gnu: r-rbgl: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 07/10: gnu: r-category: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 06/10: gnu: r-gseabase: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 08/10: gnu: r-gostats: Move to (gnu packages bioconductor).,
guix-commits <=
- 09/10: gnu: r-shortread: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12
- 10/10: gnu: r-systempiper: Move to (gnu packages bioconductor)., guix-commits, 2021/03/12