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70/377: gnu: r-structuralvariantannotation: Update to 1.8.2.
From: |
guix-commits |
Subject: |
70/377: gnu: r-structuralvariantannotation: Update to 1.8.2. |
Date: |
Thu, 2 Sep 2021 17:54:42 -0400 (EDT) |
raghavgururajan pushed a commit to branch wip-gnome
in repository guix.
commit 514454cc8f54cb9f129f72de0db4e9bbb799ad67
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Aug 24 00:33:18 2021 +0200
gnu: r-structuralvariantannotation: Update to 1.8.2.
* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to
1.8.2.
[propagated-inputs]: Add r-genomeinfodb, r-iranges, r-s4vectors, and
r-summarizedexperiment.
---
gnu/packages/bioconductor.scm | 8 ++++++--
1 file changed, 6 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index c8e33cc..0d9df49 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4221,24 +4221,28 @@ graph construction.")
(define-public r-structuralvariantannotation
(package
(name "r-structuralvariantannotation")
- (version "1.8.1")
+ (version "1.8.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "StructuralVariantAnnotation" version))
(sha256
- (base32 "13q6zbdkpx1iw6n75pggg50f9q3zb7k3dxjdra8mhi6zin7018j8"))))
+ (base32 "04ac4mjh3pgdlws0aiacqg0vd7bhg890w44r7b90p947c3rk1mfw"))))
(build-system r-build-system)
(propagated-inputs
`(("r-assertthat" ,r-assertthat)
("r-biocgenerics" ,r-biocgenerics)
("r-biostrings" ,r-biostrings)
("r-dplyr" ,r-dplyr)
+ ("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicfeatures" ,r-genomicfeatures)
("r-genomicranges" ,r-genomicranges)
+ ("r-iranges" ,r-iranges)
("r-rlang" ,r-rlang)
("r-rtracklayer" ,r-rtracklayer)
+ ("r-s4vectors" ,r-s4vectors)
("r-stringr" ,r-stringr)
+ ("r-summarizedexperiment" ,r-summarizedexperiment)
("r-variantannotation" ,r-variantannotation)))
(native-inputs
`(("r-knitr" ,r-knitr)))
- 145/377: gnu: Add rust-arrow-5., (continued)
- 145/377: gnu: Add rust-arrow-5., guix-commits, 2021/09/02
- 104/377: gnu: Add r-zscorer., guix-commits, 2021/09/02
- 113/377: gnu: Add r-paws-security-identity., guix-commits, 2021/09/02
- 122/377: gnu: Add r-zoomgroupstats., guix-commits, 2021/09/02
- 125/377: gnu: Add r-filehash., guix-commits, 2021/09/02
- 129/377: gnu: Add r-zooarch., guix-commits, 2021/09/02
- 135/377: gnu: Add r-webmockr., guix-commits, 2021/09/02
- 139/377: gnu: rust-thiserror-impl-1: Update to 1.0.26., guix-commits, 2021/09/02
- 155/377: gnu: rust-zstd-sys-1: Update to 1.6.1+zstd.1.5.0., guix-commits, 2021/09/02
- 141/377: gnu: rust-libc-0.2: Update to 0.2.101., guix-commits, 2021/09/02
- 70/377: gnu: r-structuralvariantannotation: Update to 1.8.2.,
guix-commits <=
- 72/377: gnu: r-chippeakanno: Update to 3.26.3., guix-commits, 2021/09/02
- 96/377: gnu: emacs-keycast: Update to 1.1.1., guix-commits, 2021/09/02
- 51/377: gnu: r-english: Update to 1.2-6., guix-commits, 2021/09/02
- 74/377: gnu: r-treeio: Update to 1.16.2., guix-commits, 2021/09/02
- 76/377: gnu: r-batchelor: Update to 1.8.1., guix-commits, 2021/09/02
- 89/377: gnu: ungoogled-chromium: Update to 92.0.4515.159-0.8164c91., guix-commits, 2021/09/02
- 94/377: gnu: emacs-envrc: Update to 0.4., guix-commits, 2021/09/02
- 98/377: gnu: emacs-orgit: Update to 1.7.1., guix-commits, 2021/09/02
- 110/377: gnu: Add r-paws-customer-engagement., guix-commits, 2021/09/02
- 101/377: gnu: Add r-ztree., guix-commits, 2021/09/02