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02/04: gnu: Add r-anf.
From: |
guix-commits |
Subject: |
02/04: gnu: Add r-anf. |
Date: |
Fri, 1 Jul 2022 04:30:12 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit f004033b4779dc1c6d67a525da5a45034cb68809
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Fri Jun 17 11:53:47 2022 +0200
gnu: Add r-anf.
* gnu/packages/bioconductor.scm (r-anf): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
---
gnu/packages/bioconductor.scm | 28 ++++++++++++++++++++++++++++
1 file changed, 28 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 3b8505c0ad..17e1c0f530 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2135,6 +2135,34 @@ calling, plotting, export and analysis from whole-genome
single cell
sequencing data.")
(license license:artistic2.0)))
+(define-public r-anf
+ (package
+ (name "r-anf")
+ (version "1.18.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ANF" version))
+ (sha256
+ (base32
+ "1fa2pbdapymrpz01ws0m2fbzf11d723x6rbsys29v06is57f5lpj"))))
+ (properties `((upstream-name . "ANF")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biobase
+ r-igraph
+ r-mass
+ r-rcolorbrewer
+ r-survival))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/ANF")
+ (synopsis "Affinity network fusion for complex patient clustering")
+ (description
+ "The package @dfn{ANF}(Affinity Network Fusion) provides methods for
affinity
+matrix construction and fusion as well as spectral clustering. This package is
+used for complex patient clustering by integrating multi-omic data through
affinity
+network fusion.")
+ (license license:gpl3)))
+
(define-public r-biocversion
(package
(name "r-biocversion")