[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
03/06: gnu: Add r-gtrack.
From: |
guix-commits |
Subject: |
03/06: gnu: Add r-gtrack. |
Date: |
Wed, 21 Sep 2022 05:10:21 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 6ad4d74acab1032fdb217fe7155d7a6535265e6e
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Wed Sep 21 10:54:47 2022 +0200
gnu: Add r-gtrack.
* gnu/packages/bioinformatics.scm (r-gtrack): New variable.
---
gnu/packages/bioinformatics.scm | 37 +++++++++++++++++++++++++++++++++++++
1 file changed, 37 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 46f147f496..cfae6731c4 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7338,6 +7338,43 @@ sequence.")
BAM files.")
(license license:gpl2))))
+(define-public r-gtrack
+ (let ((commit "a694fa36cedafca2658da79fc8e5b673535b15e5")
+ (revision "1"))
+ (package
+ (name "r-gtrack")
+ (version (git-version "0.1.0" revision commit))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/mskilab/gTrack/")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "070qlrbqsbj9max2vx740zigqh0ymvnw2pm1ia5la3wb4dbfwh2b"))))
+ (properties `((upstream-name . "gTrack")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biocgenerics
+ r-data-table
+ r-genomeinfodb
+ r-genomicranges
+ r-gutils
+ r-iranges
+ r-matrix
+ r-rcolorbrewer
+ r-rcpp
+ r-rcurl
+ r-rtracklayer
+ r-s4vectors))
+ (home-page "https://github.com/mskilab/gTrack/")
+ (synopsis "Plot tracks of complex genomic data across multiple genomic
windows")
+ (description
+ "This package provides an object for plotting GRanges, RleList, UCSC
+file formats, and ffTrack objects in multi-track panels.")
+ (license license:gpl2))))
+
(define-public r-presto
(let ((commit "052085db9c88aa70a28d11cc58ebc807999bf0ad")
(revision "0"))
- branch master updated (d4090c3027 -> d871080a41), guix-commits, 2022/09/21
- 02/06: gnu: Add r-bamutils., guix-commits, 2022/09/21
- 01/06: gnu: Add r-gutils., guix-commits, 2022/09/21
- 03/06: gnu: Add r-gtrack.,
guix-commits <=
- 05/06: gnu: Add r-skitools., guix-commits, 2022/09/21
- 04/06: gnu: Add r-gchain., guix-commits, 2022/09/21
- 06/06: gnu: Add r-chromunity., guix-commits, 2022/09/21