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branch master updated: gnu: bedtools-2.18: Fix build.
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guix-commits |
Subject: |
branch master updated: gnu: bedtools-2.18: Fix build. |
Date: |
Tue, 25 Apr 2023 13:41:53 -0400 |
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rekado pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new fc80efe1a0 gnu: bedtools-2.18: Fix build.
fc80efe1a0 is described below
commit fc80efe1a0ea27e429e6b7bf467dd1f6aafe3ddf
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Apr 25 19:41:05 2023 +0200
gnu: bedtools-2.18: Fix build.
* gnu/packages/bioinformatics.scm (bedtools-2.18)[arguments]: Fix operators
in
'compatibility phase.
---
gnu/packages/bioinformatics.scm | 6 +++++-
1 file changed, 5 insertions(+), 1 deletion(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index d3e806bce6..1dbacdbd8d 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -498,7 +498,11 @@ BED, GFF/GTF, VCF.")
"static constexpr float PERCENTAGE"))
(substitute* "src/utils/general/DualQueue.h"
(("template <class T, template<class T> class CompareFunc>")
- "template <class T, template<class U> class CompareFunc>"))))
+ "template <class T, template<class U> class CompareFunc>"))
+ (substitute* '("src/utils/BamTools/src/api/algorithms/Sort.h"
+
"src/utils/BamTools/src/api/internal/bam/BamMultiMerger_p.h")
+ (("(bool operator\\(\\).*) \\{" m pre)
+ (string-append pre " const {")))))
(delete 'configure)
(replace 'install
(lambda _
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