branch master updated (3676e312aa -> 8b66099722)

[guix-commits]

rekado pushed a change to branch master
in repository guix.

    from 3676e312aa gnu: libpotassco: Unbundle catch.
     new cb8d080349 import/pypi: Generate packages using pyproject-build-system.
     new ec52655ce6 guix: Upgrade to Bioconductor 3.16.
     new 921ee8789d gnu: r-with-tests: Update to 4.3.0.
     new 2f53d9cce9 import/cran: Add "unix" to list of invalid packages.
     new 90f67705f5 import/cran: Translate from xml2 to libxml2.
     new 91204fc357 gnu: Add r-densvis.
     new 9619504c81 gnu: r-reportingtools: Update to 2.39.0.
     new 9b03d78000 gnu: r-glimma: Update to 2.10.0.
     new d6acf4de78 gnu: r-shiny: Update to 1.7.4.
     new 06986a86ad gnu: r-missmethyl: Update to 1.34.0.
     new da4fbf5604 gnu: r-abarray: Update to 1.68.0.
     new ef9b160820 gnu: r-absseq: Update to 1.54.0.
     new 331bb1ea91 gnu: r-adacgh2: Update to 2.40.0.
     new 02c3985ecf gnu: r-adam: Update to 1.16.0.
     new bf29af41c9 gnu: r-adamgui: Update to 1.16.0.
     new 4690ee5805 gnu: r-adimpute: Update to 1.10.0.
     new 624498f085 gnu: r-adsplit: Update to 1.70.0.
     new 457938bbb0 gnu: r-affixcan: Update to 1.18.0.
     new 99e827e67c gnu: r-affyilm: Update to 1.52.0.
     new f862832e36 gnu: r-affylmgui: Update to 1.74.0.
     new 78b3727b60 gnu: r-affyplm: Update to 1.76.0.
     new 9baa783e63 gnu: r-affyrnadegradation: Update to 1.46.0.
     new 626b010f1a gnu: r-agdex: Update to 1.48.0.
     new 0174fb6d49 gnu: r-aggregatebiovar: Update to 1.10.0.
     new 89c4664ac7 gnu: r-agilp: Update to 3.32.0.
     new a8730669b5 gnu: r-adductomicsr: Update to 1.16.0.
     new 47024dae6e gnu: r-agimicrorna: Update to 2.50.0.
     new 02a34b10b6 gnu: r-aims: Update to 1.32.0.
     new 945ed79525 gnu: r-airpart: Update to 1.8.0.
     new a49b8d3be0 gnu: r-amountain: Update to 1.26.0.
     new 4b2295bd4f gnu: r-amplican: Update to 1.21.0.
     new ab79d3a4b8 gnu: r-amaretto: Update to 1.16.0.
     new 1f753b82c1 gnu: r-anaquin: Update to 2.24.0.
     new 71b23bf5e1 gnu: r-ancombc: Update to 2.2.0.
     new 6027d657bd gnu: r-animalcules: Update to 1.16.0.
     new fd5e94f6df gnu: r-annotationhubdata: Update to 1.30.0.
     new 87932885ea gnu: r-anvil: Update to 1.12.0.
     new 769af4fda7 gnu: r-aldex2: Update to 1.32.0.
     new 76ffa191be gnu: r-alevinqc: Update to 1.16.0.
     new 19636f0341 gnu: r-alphabeta: Update to 1.14.0.
     new dec3658f6b gnu: r-alpine: Update to 1.25.0.
     new 55f6d75cdb gnu: r-alpsnmr: Update to 4.2.0.
     new 8e5e97293d gnu: r-altcdfenvs: Update to 2.62.0.
     new 099340458b gnu: r-aneufinder: Update to 1.28.0.
     new 18ad546d0a gnu: r-anf: Update to 1.22.0.
     new b77e71f07c gnu: r-annmap: Update to 1.42.0.
     new 0e88aa5b07 gnu: r-antiprofiles: Update to 1.40.0.
     new 5329b80aa1 gnu: r-arrayexpress: Update to 1.60.0.
     new 4a5f8cede6 gnu: r-asafe: Update to 1.26.0.
     new e1e75eec31 gnu: r-aseb: Update to 1.44.0.
     new d3ae3e616e gnu: r-asgsca: Update to 1.34.0.
     new ba469d4674 gnu: r-asics: Update to 2.16.0.
     new 0968cf8f55 gnu: r-aspli: Update to 2.10.0.
     new 32b0da7762 gnu: r-assessorf: Update to 1.18.0.
     new 7751b88692 gnu: r-asset: Update to 2.18.0.
     new 9f61c365a4 gnu: r-atena: Update to 1.6.0.
     new 36aa29a62f gnu: r-atsnp: Update to 1.16.0.
     new ed2578b585 gnu: r-attract: Update to 1.52.0.
     new d12336de7d gnu: r-awfisher: Update to 1.14.0.
     new 14191d89a7 gnu: r-awst: Update to 1.8.0.
     new bc466e59b8 gnu: r-baalchip: Update to 1.26.0.
     new ff5191816e gnu: r-basespacer: Update to 1.44.0.
     new e10c8fe41a gnu: r-bader: Update to 1.38.0.
     new 4f4d38cc4d gnu: r-badregionfinder: Update to 1.28.0.
     new 7bce4cdacb gnu: r-bambu: Update to 3.2.0.
     new c6d14bd6fb gnu: r-bandits: Update to 1.16.0.
     new 41bff44b32 gnu: r-banocc: Update to 1.24.0.
     new ae85652e4b gnu: r-barcodetrackr: Update to 1.8.0.
     new 3b302bdf35 gnu: r-biocversion: Update to 3.17.1.
     new cb191936d8 gnu: r-biocgenerics: Update to 0.46.0.
     new 084e990d2f gnu: r-breakpointr: Update to 1.18.0.
     new f869abfae3 gnu: r-cardelino: Update to 1.2.0.
     new 6233b26d1d gnu: r-coverageview: Update to 1.38.0.
     new 9b305554a3 gnu: r-cummerbund: Update to 2.42.0.
     new 01ba2a24d2 gnu: r-dama: Update to 1.72.0.
     new 8f93a53a4c gnu: r-damefinder: Update to 1.12.0.
     new 4837210129 gnu: r-dearseq: Update to 1.12.0.
     new 2bf6f659c4 gnu: Add java-pj.
     new 52e738d346 gnu: r-debcam: Update to 1.18.0.
     new c9794ffe59 gnu: r-decipher: Update to 2.28.0.
     new 8ccd86a17b gnu: r-decomptumor2sig: Update to 2.16.0.
     new 37a7539db3 gnu: r-deconrnaseq: Update to 1.42.0.
     new 228c0fae2b gnu: r-decontam: Update to 1.20.0.
     new 28b2d8a1e3 gnu: r-deconvr: Update to 1.6.0.
     new 57bb01b808 gnu: r-decoupler: Update to 2.6.0.
     new c179c05e35 gnu: r-deepsnv: Update to 1.46.0.
     new b7b1423882 gnu: r-delayedarray: Update to 0.25.0.
     new b23aac21d5 gnu: r-derfinderhelper: Update to 1.34.0.
     new c901f7c4f3 gnu: r-dmrcate: Update to 2.14.0.
     new 72bfb25766 gnu: r-drimseq: Update to 1.28.0.
     new 0ef0e70d81 gnu: r-dss: Update to 2.48.0.
     new e057271297 gnu: r-bluster: Update to 1.10.0.
     new 09260401c4 gnu: r-ideoviz: Update to 1.36.0.
     new 116bc67509 gnu: r-infercnv: Update to 1.16.0.
     new a0846151b3 gnu: r-iranges: Update to 2.34.0.
     new 669d0d17da gnu: r-isoformswitchanalyzer: Update to 1.21.0.
     new 21b305edbe gnu: r-italics: Update to 2.60.0.
     new 6a19dd1e21 gnu: r-affy: Update to 1.78.0.
     new b121b78bda gnu: r-affycomp: Update to 1.76.0.
     new a7485d9850 gnu: r-affycontam: Update to 1.58.0.
     new 5d8d8c2256 gnu: r-affycoretools: Update to 1.72.0.
     new 1b4dd53a4f gnu: r-affyio: Update to 1.70.0.
     new 4f2c3411ec gnu: r-affxparser: Update to 1.72.0.
     new d9d1b77c84 gnu: r-annotate: Update to 1.78.0.
     new 46ff186f73 gnu: r-annotationdbi: Update to 1.62.0.
     new aa97ff9c34 gnu: r-annotationfilter: Update to 1.24.0.
     new f6c878674f gnu: r-annotationforge: Update to 1.42.0.
     new 83b381a95b gnu: r-annotationhub: Update to 3.8.0.
     new 968878ef27 gnu: r-aroma-light: Update to 3.30.0.
     new b8c4b8b44f gnu: r-bamsignals: Update to 1.32.0.
     new 766fb8a21c gnu: r-biobase: Update to 2.60.0.
     new d0199e0c5c gnu: r-biomart: Update to 2.56.0.
     new c9d5ec9e66 gnu: r-biocparallel: Update to 1.34.0.
     new bbd90f85b9 gnu: r-biostrings: Update to 2.68.0.
     new 9201a7728b gnu: r-biovizbase: Update to 1.48.0.
     new 5d526f71c8 gnu: r-bsgenome: Update to 1.68.0.
     new 7b4443f365 gnu: r-category: Update to 2.66.0.
     new 6c700d8b3a gnu: r-champ: Update to 2.30.0.
     new 219901a7b2 gnu: r-chipseeker: Update to 1.36.0.
     new f86ea9868a gnu: r-chipseq: Update to 1.50.0.
     new 176c45cb21 gnu: r-complexheatmap: Update to 2.16.0.
     new dc78185fc7 gnu: r-deseq2: Update to 1.40.0.
     new f327d05ecc gnu: r-dexseq: Update to 1.46.0.
     new 876c2dcb74 gnu: r-diffcyt: Update to 1.20.0.
     new 70784f1dcf gnu: r-dirichletmultinomial: Update to 1.42.0.
     new 59cecee237 gnu: r-dittoseq: Update to 1.12.0.
     new 2a1f12e3d1 gnu: r-edaseq: Update to 2.34.0.
     new cbe7726d68 gnu: r-edger: Update to 3.42.0.
     new f9b6a2ad85 gnu: r-enmix: Update to 1.36.0.
     new 3ce5803cac gnu: r-ensembldb: Update to 2.24.0.
     new 476042884c gnu: r-fastseg: Update to 1.46.0.
     new 70c3d4ac37 gnu: r-gage: Update to 2.50.0.
     new d7a10c3d52 gnu: r-genefilter: Update to 1.82.0.
     new ff563c9a60 gnu: r-geneoverlap: Update to 1.36.0.
     new dac6f08730 gnu: r-genomation: Update to 1.32.0.
     new d87887a2ba gnu: r-genomeinfodb: Update to 1.36.0.
     new 8e72841e03 gnu: r-genomicalignments: Update to 1.36.0.
     new 25ffc3d9ef gnu: r-genomicfeatures: Update to 1.52.0.
     new 7c75371b19 gnu: r-genomicfiles: Update to 1.36.0.
     new a6f4e6e7fb gnu: r-genomicranges: Update to 1.52.0.
     new 5cb6453b43 gnu: r-glad: Update to 2.64.0.
     new 96613abcc5 gnu: r-globaltest: Update to 5.54.0.
     new 57e4aab4ee gnu: r-gostats: Update to 2.66.0.
     new f7a3988fc7 gnu: r-gseabase: Update to 1.62.0.
     new fdc4c55da2 gnu: r-harshlight: Update to 1.72.0.
     new c3882920fd gnu: r-hpar: Update to 1.42.0.
     new 8d8a7d55e2 gnu: r-rhtslib: Update to 2.2.0.
     new ab9cdb4082 gnu: r-impute: Update to 1.74.0.
     new 2c32ed3955 gnu: r-interactivedisplaybase: Update to 1.38.0.
     new b962e908a0 gnu: r-keggrest: Update to 1.40.0.
     new d1da543257 gnu: r-limma: Update to 3.56.0.
     new 343036f151 gnu: r-maaslin2: Update to 1.13.0.
     new 4d1208e654 gnu: r-made4: Update to 1.74.0.
     new 6e5c2c48df gnu: r-makecdfenv: Update to 1.76.0.
     new 3c8d7bd3c6 gnu: r-manor: Update to 1.72.0.
     new 380e27f153 gnu: r-maser: Update to 1.18.0.
     new 0ee6b4203d gnu: r-metagenomeseq: Update to 1.42.0.
     new 15efeebe53 gnu: r-metaneighbor: Update to 1.20.0.
     new 2ebeeeb438 gnu: r-methylkit: Update to 1.26.0.
     new da92987a4b gnu: r-mmuphin: Update to 1.14.0.
     new 37e95f3c9c gnu: r-muscat: Update to 1.14.0.
     new ba6ed3ff40 gnu: r-mutationalpatterns: Update to 3.10.0.
     new 5c6355ca35 gnu: r-msa: Update to 1.32.0.
     new 6bbb3bedb1 gnu: r-msnbase: Update to 2.26.0.
     new 6d09227e1f gnu: r-msnid: Update to 1.34.0.
     new 3e05ea0edb gnu: r-mzid: Update to 1.38.0.
     new 394c951ba2 gnu: r-mzr: Update to 2.34.0.
     new 3c31e017e2 gnu: r-organism-dplyr: Update to 1.28.0.
     new 18d4032d2a gnu: r-organismdbi: Update to 1.42.0.
     new e408cd70e8 gnu: r-oscope: Update to 1.30.0.
     new fdf3453dad gnu: r-pcaexplorer: Update to 2.26.0.
     new 8e08912fcd gnu: r-pcamethods: Update to 1.92.0.
     new 70af2c3137 gnu: r-protgenerics: Update to 1.32.0.
     new bc5d14d246 gnu: r-rbgl: Update to 1.76.0.
     new 07a18fe524 gnu: r-rcas: Update to 1.26.0.
     new cc5dc923a6 gnu: r-regioner: Update to 1.32.0.
     new 4e9e8ed194 gnu: r-rhdf5: Update to 2.44.0.
     new c2f9c0af28 gnu: r-rhdf5filters: Update to 1.12.0.
     new 04a5521933 gnu: r-rsamtools: Update to 2.16.0.
     new 2521248770 gnu: r-rtracklayer: Update to 1.60.0.
     new 22f63061e3 gnu: r-scannotatr: Update to 1.6.0.
     new 70433802aa gnu: r-scdblfinder: Update to 1.14.0.
     new 3cd53df25a gnu: r-scmap: Update to 1.22.0.
     new 8e9d0d590f gnu: r-scry: Update to 1.12.0.
     new bbdb686878 gnu: r-seqlogo: Update to 1.66.0.
     new 6264a7cca0 gnu: r-seqpattern: Update to 1.32.0.
     new 7c53819208 gnu: r-shinymethyl: Update to 1.36.0.
     new 8db5bea2ba gnu: r-shortread: Update to 1.58.0.
     new b28d21fff2 gnu: r-simplifyenrichment: Update to 1.10.0.
     new a48cb51ed0 gnu: r-transcriptr: Update to 1.28.0.
     new 93c0b52f6a gnu: r-trajectoryutils: Update to 1.8.0.
     new 15caa80904 gnu: r-scds: Update to 1.16.0.
     new 5698bf6fed gnu: r-slingshot: Update to 2.8.0.
     new b54be030aa gnu: r-stager: Update to 1.22.0.
     new 08ca51d2e0 gnu: r-stringdb: Update to 2.12.0.
     new 028e3d5219 gnu: r-structuralvariantannotation: Update to 1.16.0.
     new 77e5cffb35 gnu: r-summarizedexperiment: Update to 1.30.0.
     new ec18aab140 gnu: r-sva: Update to 3.48.0.
     new 221c9b3914 gnu: r-systempiper: Update to 2.6.0.
     new ea8a5b5d01 gnu: r-topgo: Update to 2.52.0.
     new 998c7242c2 gnu: r-tximport: Update to 1.28.0.
     new 7a6fa454aa gnu: r-variantannotation: Update to 1.46.0.
     new 681a784204 gnu: r-vsn: Update to 3.68.0.
     new 753beb909f gnu: r-xina: Update to 1.18.0.
     new ed59644ba0 gnu: r-xmapbridge: Update to 1.58.0.
     new d9a9bcf5c6 gnu: r-xvector: Update to 0.40.0.
     new 61b9cc9b50 gnu: r-zlibbioc: Update to 1.46.0.
     new e82e8329f5 gnu: r-zellkonverter: Update to 1.10.0.
     new adfdd8e86e gnu: r-geneplotter: Update to 1.78.0.
     new eef6764047 gnu: r-oligoclasses: Update to 1.62.0.
     new 45e8cd7612 gnu: r-oligo: Update to 1.64.0.
     new 4d031b58f1 gnu: r-quantsmooth: Update to 1.66.0.
     new df0d0504fb gnu: r-qvalue: Update to 2.32.0.
     new ef2994f256 gnu: r-apeglm: Update to 1.22.0.
     new 4985c9601e gnu: r-greylistchip: Update to 1.32.0.
     new 15daabb22f gnu: r-diffbind: Update to 3.10.0.
     new e7bc7ec54f gnu: r-mbkmeans: Update to 1.16.0.
     new c0d21bfe64 gnu: r-multtest: Update to 2.56.0.
     new 54614fc9d5 gnu: r-graph: Update to 1.78.0.
     new e3732dcda4 gnu: r-pepsnmr: Update to 1.18.0.
     new 1e7943fe99 gnu: r-chippeakanno: Update to 3.34.0.
     new 4285416811 gnu: r-matrixgenerics: Update to 1.12.0.
     new 3c7a962f03 gnu: r-marray: Update to 1.78.0.
     new a468586541 gnu: r-cghbase: Update to 1.60.0.
     new bed7bcd8f5 gnu: r-cghcall: Update to 2.62.0.
     new cbf2423878 gnu: r-qdnaseq: Update to 1.36.0.
     new 116c7b6aeb gnu: r-chipcomp: Update to 1.30.0.
     new f76db3966e gnu: r-riboprofiling: Update to 1.30.0.
     new c163509202 gnu: r-interactionset: Update to 1.28.0.
     new f19e919ff0 gnu: r-genomicinteractions: Update to 1.34.0.
     new 330e1d4053 gnu: r-ctc: Update to 1.74.0.
     new d2eda77f40 gnu: r-goseq: Update to 1.52.0.
     new 368dd4853e gnu: r-glmgampoi: Update to 1.12.0.
     new 998baf7238 gnu: r-rots: Update to 1.28.0.
     new 25b2a51612 gnu: r-plgem: Update to 1.72.0.
     new 89ee68eaf2 gnu: r-inspect: Update to 1.30.0.
     new e88fa28e21 gnu: r-dnabarcodes: Update to 1.30.0.
     new 12c8b61d67 gnu: r-ruvseq: Update to 1.34.0.
     new f514cc8ad7 gnu: r-biocneighbors: Update to 1.18.0.
     new e176812b9f gnu: r-scaledmatrix: Update to 1.7.1.
     new 0a1fbf006e gnu: r-treeio: Update to 1.24.0.
     new ea5a5623b1 gnu: r-treesummarizedexperiment: Update to 2.8.0.
     new 9886b96ef8 gnu: r-ggtree: Update to 3.8.0.
     new 959fae1d39 gnu: r-metapod: Update to 1.8.0.
     new 6fd03125bf gnu: r-biocsingular: Update to 1.16.0.
     new 3531182e1e gnu: r-destiny: Update to 3.14.0.
     new 1f83062449 gnu: r-savr: Update to 1.37.0.
     new 559ed048b6 gnu: r-chipexoqual: Update to 1.24.0.
     new b861c08de6 gnu: r-dnacopy: Update to 1.74.0.
     new ff78701399 gnu: r-ebseq: Update to 1.40.0.
     new ad80b3fa5e gnu: r-karyoploter: Update to 1.26.0.
     new cb5b5722bd gnu: r-lpsymphony: Update to 1.28.0.
     new 6c7f4296b9 gnu: r-ihw: Update to 1.28.0.
     new c8315e500c gnu: r-icobra: Update to 1.28.0.
     new 1f44f80239 gnu: r-residualmatrix: Update to 1.10.0.
     new cffec95040 gnu: r-batchelor: Update to 1.16.0.
     new 6a313f06bf gnu: r-mast: Update to 1.26.0.
     new 196e329b69 gnu: r-monocle: Update to 2.28.0.
     new 2e1495c9f5 gnu: r-noiseq: Update to 2.44.0.
     new 74aa56e71f gnu: r-scdd: Update to 1.24.0.
     new 0410b30ba1 gnu: r-scone: Update to 1.24.0.
     new 98da84a5a6 gnu: r-geoquery: Update to 2.68.0.
     new ea03105d25 gnu: r-illuminaio: Update to 0.42.0.
     new 73b17e2b61 gnu: r-siggenes: Update to 1.74.0.
     new 8d0843d3eb gnu: r-bumphunter: Update to 1.42.0.
     new 957cc37181 gnu: r-mia: Update to 1.8.0.
     new 91758952d4 gnu: r-microbiome: Update to 1.22.0.
     new 44602f4a65 gnu: r-milor: Update to 1.8.1.
     new 596dec968e gnu: r-minfi: Update to 1.46.0.
     new ccc6ebc63f gnu: r-methylumi: Update to 2.46.0.
     new 3ae9922530 gnu: r-lumi: Update to 2.52.0.
     new 0ecfa451a0 gnu: r-linnorm: Update to 2.24.0.
     new 7f77509696 gnu: r-ioniser: Update to 2.24.0.
     new 419e701243 gnu: r-tradeseq: Update to 1.14.0.
     new 2a6a1b55a1 gnu: r-varianttools: Update to 1.42.0.
     new f40f9d0bb9 gnu: r-heatplus: Update to 3.8.0.
     new 288da213c8 gnu: r-gosemsim: Update to 2.26.0.
     new 2cbb845e7d gnu: r-anota: Update to 1.48.0.
     new 490e8a9004 gnu: r-fcscan: Update to 1.14.0.
     new d85403b837 gnu: r-fgsea: Update to 1.26.0.
     new 96575cde15 gnu: r-dose: Update to 3.26.0.
     new e878a97766 gnu: r-enrichplot: Update to 1.20.0.
     new e2484544a5 gnu: r-clusterprofiler: Update to 4.8.0.
     new 46dd98333f gnu: r-clusterexperiment: Update to 2.20.0.
     new 34b3010a74 gnu: r-mlinterfaces: Update to 1.80.0.
     new ae28601ad1 gnu: r-annaffy: Update to 1.72.0.
     new d596e1db96 gnu: r-a4core: Update to 1.48.0.
     new d2e98617e8 gnu: r-a4classif: Update to 1.48.0.
     new 71118c1b26 gnu: r-a4preproc: Update to 1.48.0.
     new 775bb851d1 gnu: r-a4reporting: Update to 1.48.0.
     new f9f9c3f64e gnu: r-a4base: Update to 1.48.0.
     new 6fbb674db9 gnu: r-a4: Update to 1.48.0.
     new 17f1c0e530 gnu: r-abseqr: Update to 1.18.0.
     new d4f475a68b gnu: r-bacon: Update to 1.28.0.
     new 4d36726a8c gnu: r-rgadem: Update to 2.48.0.
     new cee1f0ae56 gnu: r-motifdb: Update to 1.42.0.
     new dfd9bb7b1a gnu: r-motifbreakr: Update to 2.13.7.
     new 1d91760996 gnu: r-motifstack: Update to 1.44.0.
     new 46b87ee7e7 gnu: r-bionetstat: Update to 1.20.0.
     new 98e54bf5ca gnu: r-genomicscores: Update to 2.12.0.
     new 88362fc7ff gnu: r-atacseqqc: Update to 1.24.0.
     new c901ed6127 gnu: r-gofuncr: Update to 1.20.0.
     new ecc70c623f gnu: r-annotationtools: Update to 1.74.0.
     new bade0db654 gnu: r-allelicimbalance: Update to 1.38.0.
     new ba31e05d75 gnu: r-aucell: Update to 1.22.0.
     new 6f5209f1a9 gnu: r-ebimage: Update to 4.42.0.
     new 7cbc47eadd gnu: r-yamss: Update to 1.26.0.
     new 46158e258b gnu: r-gtrellis: Update to 1.32.0.
     new ef2b8e94bf gnu: r-somaticsignatures: Update to 2.36.0.
     new a88af8976b gnu: r-yapsa: Update to 1.25.0.
     new 48e5c920d2 gnu: r-gcrma: Update to 2.72.0.
     new 041dbd604b gnu: r-quantro: Update to 1.34.0.
     new 4c26b3049a gnu: r-yarn: Update to 1.26.0.
     new 88acb3def5 gnu: r-roar: Update to 1.36.0.
     new 48ad54e1c0 gnu: r-massspecwavelet: Update to 1.66.0.
     new dd19f928e7 gnu: r-xcms: Update to 3.22.0.
     new 1ad2255a5b gnu: r-wppi: Update to 1.8.0.
     new a8a248b0c8 gnu: r-wrench: Update to 1.18.0.
     new f86f2584f9 gnu: r-wiggleplotr: Update to 1.24.0.
     new 58a016c5b2 gnu: r-widgettools: Update to 1.78.0.
     new f8add36afb gnu: r-webbioc: Update to 1.72.0.
     new 8f89dba276 gnu: r-zinbwave: Update to 1.22.0.
     new 5c7824bffa gnu: r-zfpkm: Update to 1.22.0.
     new 0bffa9d7e7 gnu: r-rbowtie2: Update to 2.6.0.
     new 8f88c0243c gnu: r-progeny: Update to 1.22.0.
     new 2ee15aee56 gnu: r-arrmnormalization: Update to 1.40.0.
     new 277f476f60 gnu: r-biocfilecache: Update to 2.8.0.
     new c91f3192bc gnu: r-iclusterplus: Update to 1.36.0.
     new e438a5c9d9 gnu: r-rbowtie: Update to 1.40.0.
     new 3a2a833691 gnu: r-sgseq: Update to 1.34.0.
     new b8c4548ac0 gnu: r-rhisat2: Update to 1.16.0.
     new 8d3676e217 gnu: r-quasr: Update to 1.40.0.
     new 29649ada9e gnu: r-rqc: Update to 1.34.0.
     new addd78c953 gnu: r-birewire: Update to 3.32.0.
     new 74591bcb64 gnu: r-multidataset: Update to 1.28.0.
     new bd322e08de gnu: r-ropls: Update to 1.32.0.
     new 96ae714e28 gnu: r-biosigner: Update to 1.28.0.
     new ec0fc09a26 gnu: r-annotatr: Update to 1.26.0.
     new f730a027c8 gnu: r-rsubread: Update to 2.14.0.
     new 52719d2995 gnu: r-flowai: Update to 1.30.0.
     new bff572d037 gnu: r-consensusclusterplus: Update to 1.64.0.
     new 643bf1a6c7 gnu: r-cytolib: Update to 2.12.0.
     new 0b653ec7f9 gnu: r-flowcore: Update to 2.12.0.
     new e346747a7b gnu: r-flowmeans: Update to 1.60.0.
     new 557cbfd68c gnu: r-ncdfflow: Update to 2.46.0.
     new c83337a943 gnu: r-ggcyto: Update to 1.28.0.
     new ea4adaa7e8 gnu: r-flowviz: Update to 1.64.0.
     new 9eade45bfb gnu: r-flowclust: Update to 3.38.0.
     new 2cf5e0cb7a gnu: r-rprotobuflib: Update to 2.12.0.
     new c31ae38d58 gnu: r-flowworkspace: Update to 4.12.0.
     new fadfa9cc60 gnu: r-flowstats: Update to 4.12.0.
     new 43b33d7992 gnu: r-opencyto: Update to 2.12.0.
     new 974dba4509 gnu: r-cytoml: Update to 2.12.0.
     new afb011a051 gnu: r-flowsom: Update to 2.8.0.
     new 043d2dd022 gnu: r-mixomics: Update to 6.24.0.
     new c5aba0be7c gnu: r-depecher: Update to 1.16.0.
     new 44aeef066d gnu: r-rcistarget: Update to 1.20.0.
     new 3481a56a13 gnu: r-chicago: Update to 1.28.0.
     new 52fd33e996 gnu: r-cicero: Update to 1.18.0.
     new a6361a752d gnu: r-circrnaprofiler: Update to 1.14.0.
     new 733b8a2e0d gnu: r-genie3: Update to 1.22.0.
     new 69ed0c145f gnu: r-roc: Update to 1.76.0.
     new 217c1275ac gnu: r-watermelon: Update to 2.6.0.
     new 2d821f86cb gnu: r-gdsfmt: Update to 1.36.0.
     new 3dd7d3bf9e gnu: r-bigmelon: Update to 1.26.0.
     new 5d99ad4da4 gnu: r-seqbias: Update to 1.48.0.
     new 77d55ff8e6 gnu: r-reqon: Update to 1.46.0.
     new d04f67f677 gnu: r-wavcluster: Update to 2.34.0.
     new 9340b270f7 gnu: r-tilingarray: Update to 1.78.0.
     new c1b48012e6 gnu: r-variantfiltering: Update to 1.36.0.
     new b352e03d83 gnu: r-variancepartition: Update to 1.30.0.
     new f7c2c248d5 gnu: r-htqpcr: Update to 1.54.0.
     new 47b35d3459 gnu: r-unifiedwmwqpcr: Update to 1.36.0.
     new b212b9ca62 gnu: r-universalmotif: Update to 1.18.0.
     new 9b4ebaec75 gnu: r-ace: Update to 1.18.0.
     new f09fd77618 gnu: r-acgh: Update to 1.78.0.
     new 89a1bc74ce gnu: r-acme: Update to 2.56.0.
     new e8d5475045 gnu: r-acde: Update to 1.30.0.
     new ee4f843e46 gnu: r-bgmix: Update to 1.59.0.
     new 90fc4b4a51 gnu: r-bgx: Update to 1.66.0.
     new 807271f5b5 gnu: r-bhc: Update to 1.52.0.
     new f273e6f729 gnu: r-bicare: Update to 1.58.0.
     new 7d2852ed0e gnu: r-bifet: Update to 1.20.0.
     new c6354be8c6 gnu: r-rsbml: Update to 2.58.0.
     new 7f03f14e5f gnu: r-hypergraph: Update to 1.72.0.
     new c0b7b4ed00 gnu: r-hyperdraw: Update to 1.52.0.
     new d3f1ba4bf2 gnu: r-biggr: Update to 1.36.0.
     new 02451fb098 gnu: r-bigpint: Update to 1.15.0.
     new 89fce342bb gnu: r-chemminer: Update to 3.52.0.
     new 29944820e1 gnu: r-fmcsr: Update to 1.42.0.
     new 9adef62a5b gnu: r-bioassayr: Update to 1.38.0.
     new b6350013f8 gnu: r-biobroom: Update to 1.32.0.
     new 2474b005cd gnu: r-graphite: Update to 1.46.0.
     new f7e7bb2007 gnu: r-reactomepa: Update to 1.44.0.
     new 39defa2968 gnu: r-ebarrays: Update to 2.64.0.
     new 81de52f013 gnu: r-biocbaseutils: Update to 1.2.0.
     new b5133a0dc3 gnu: r-bioccheck: Update to 1.36.0.
     new d277f69643 gnu: r-biocgraph: Update to 1.62.0.
     new 0c2009a1b0 gnu: r-biocstyle: Update to 2.28.0.
     new d0682c7c04 gnu: r-biocviews: Update to 1.68.0.
     new 29f1477229 gnu: r-experimenthub: Update to 2.8.0.
     new 621526d5e3 gnu: r-grohmm: Update to 1.34.0.
     new 94ab8db2d7 gnu: r-multiassayexperiment: Update to 1.26.0.
     new d63b92465b gnu: r-bioconcotk: Update to 1.20.0.
     new 8f9bd84fd9 gnu: r-biocor: Update to 1.24.0.
     new 72ba2d8f48 gnu: r-biocpkgtools: Update to 1.18.0.
     new 37de521f22 gnu: r-biocset: Update to 1.14.0.
     new 2f1c5f361f gnu: r-biocworkflowtools: Update to 1.26.0.
     new f2ce4a037f gnu: r-biodist: Update to 1.72.0.
     new bd1b41e8d1 gnu: r-pcatools: Update to 2.12.0.
     new aff09ecb05 gnu: r-rgreat: Update to 2.2.0.
     new ebd0bdd84c gnu: r-m3c: Update to 1.22.0.
     new ae8956bbc8 gnu: r-icens: Update to 1.72.0.
     new ed6d919ef0 gnu: r-preprocesscore: Update to 1.62.0.
     new 2e81140c18 gnu: r-s4vectors: Update to 0.38.0.
     new 85bc989a66 gnu: r-rgraphviz: Update to 2.44.0.
     new 8866d47bce gnu: r-fishpond: Update to 2.6.0.
     new 765b41564a gnu: r-fithic: Update to 1.26.0.
     new 143b70c92b gnu: r-hitc: Update to 1.44.0.
     new 582dac2949 gnu: r-hdf5array: Update to 1.28.0.
     new f482bb1256 gnu: r-rhdf5lib: Update to 1.22.0.
     new e76467b72c gnu: r-beachmat: Update to 2.16.0.
     new b9b6c29a75 gnu: r-beadarraysnp: Update to 1.66.0.
     new 5ab3d66ffc gnu: r-cner: Update to 1.36.0.
     new 99c001303d gnu: r-tfbstools: Update to 1.38.0.
     new 6263d39069 gnu: r-maftools: Update to 2.16.0.
     new 0609a92c0b gnu: r-motifmatchr: Update to 1.22.0.
     new 09ada1eb1e gnu: r-chromvar: Update to 1.22.0.
     new b0a6411b85 gnu: r-singlecellexperiment: Update to 1.22.0.
     new 8dc03857a6 gnu: r-singler: Update to 2.2.0.
     new febe8360c3 gnu: r-scuttle: Update to 1.10.0.
     new c3056799b3 gnu: r-scater: Update to 1.28.0.
     new 1435a289dd gnu: r-scran: Update to 1.28.0.
     new 4b4df8d533 gnu: r-sparsematrixstats: Update to 1.12.0.
     new 643e63ef61 gnu: r-delayedmatrixstats: Update to 1.22.0.
     new f4c4bc5473 gnu: r-mscoreutils: Update to 1.12.0.
     new 6459537f90 gnu: r-msfeatures: Update to 1.8.0.
     new bca0afda01 gnu: r-biocio: Update to 1.10.0.
     new 0d854ac754 gnu: r-msmseda: Update to 1.38.0.
     new d1e16723dd gnu: r-msmstests: Update to 1.38.0.
     new bc7db31ceb gnu: r-catalyst: Update to 1.24.0.
     new 764220f848 gnu: r-erma: Update to 1.16.0.
     new 311339801e gnu: r-ggbio: Update to 1.48.0.
     new e8a52e54f7 gnu: r-gviz: Update to 1.44.0.
     new 70514e0281 gnu: r-gwascat: Update to 2.32.0.
     new c00d4a394d gnu: r-kegggraph: Update to 1.60.0.
     new ef6059cf27 gnu: r-ldblock: Update to 1.30.0.
     new 61432d53ff gnu: r-pathview: Update to 1.40.0.
     new 72288df46a gnu: r-snapcgh: Update to 1.70.0.
     new 1b3be92024 gnu: r-snpstats: Update to 1.50.0.
     new 3616dd923f gnu: r-chromstar: Update to 1.26.0.
     new e5e7089db5 gnu: r-guitar: Update to 2.16.0.
     new c09a9bc427 gnu: r-ballgown: Update to 2.32.0.
     new 0d879deae1 gnu: r-megadepth: Update to 1.9.0.
     new 4dd9fdb68f gnu: r-beclear: Update to 2.16.0.
     new 189f9d805e gnu: r-bgeecall: Update to 1.16.0.
     new 1ff662c8e2 gnu: r-bgeedb: Update to 2.26.0.
     new d297d24edb gnu: r-biobtreer: Update to 1.12.0.
     new 939155e312 gnu: r-minet: Update to 3.58.0.
     new 1b80b39aa7 gnu: r-genetclassifier: Update to 1.40.0.
     new ad0efa110e gnu: r-dir-expiry: Update to 1.8.0.
     new d91cc19ee9 gnu: r-basilisk-utils: Update to 1.12.0.
     new fbd4e9195f gnu: r-basilisk: Update to 1.12.0.
     new 4684b0d333 gnu: r-biocthis: Update to 1.10.0.
     new 4eb1e7e542 gnu: r-biocdockermanager: Update to 1.11.0.
     new c10979dcbe gnu: r-biodb: Update to 1.8.0.
     new 3d49b388a5 gnu: r-biomformat: Update to 1.28.0.
     new ce9ee69644 gnu: r-mvcclass: Update to 1.74.0.
     new 26c76918cb gnu: r-biomvcclass: Update to 1.68.0.
     new e1292069fc gnu: r-bionero: Update to 1.8.0.
     new cb91d8ff79 gnu: r-bionet: Update to 1.60.0.
     new 5a5d466e15 gnu: r-bioqc: Update to 1.28.0.
     new 0f594abe26 gnu: r-biotip: Update to 1.14.0.
     new 096133af16 gnu: r-biotmle: Update to 1.24.0.
     new 56586f9b9e gnu: r-bsseq: Update to 1.36.0.
     new 3862877bb2 gnu: r-dada2: Update to 1.28.0.
     new 15f364a933 gnu: r-dmrseq: Update to 1.20.0.
     new b2a3e274ec gnu: r-omicade4: Update to 1.40.0.
     new 04978d4592 gnu: r-omnipathr: Update to 3.8.0.
     new c33697b714 gnu: r-biscuiteer: Update to 1.14.0.
     new a605826139 gnu: r-tricycle: Update to 1.8.0.
     new e0c28e52e4 gnu: r-tximeta: Update to 1.18.0.
     new 6cb123b190 gnu: r-phyloseq: Update to 1.44.0.
     new 63dea3caf0 gnu: r-cplm: Fix build with R 4.3.0.
     new 9a2908211c gnu: r-coin: Delete file with bad encoding.
     new 46d78bf045 gnu: r-hpar: Avoid internet access.
     new 376c52a949 gnu: r-rliger: Strip jar timestamps.
     new 49afe64152 gnu: r-radiant-data: Update to 1.5.6.
     new 2b08f6874e gnu: r-tictoc: Update to 1.2.
     new 5f061c25f3 gnu: r-castor: Update to 1.7.9.
     new f80e8e4574 gnu: r-cplm: Update to 0.7-11.
     new b1880c7759 gnu: r-carrier: Update to 0.1.1.
     new cf0453d1d5 gnu: r-climatol: Update to 4.0.0.
     new 6a945dd12c gnu: r-fontawesome: Update to 0.5.1.
     new 7e88aaefc0 gnu: r-ps: Update to 1.7.5.
     new e9d5defb87 gnu: r-ctrdata: Update to 1.13.0.
     new fd5ff35dde gnu: r-fitdistrplus: Update to 1.1-11.
     new 200e08161f gnu: r-recipes: Update to 1.0.6.
     new 2ee7d66973 gnu: r-xts: Update to 0.13.1.
     new 81b339bb00 gnu: r-processx: Update to 3.8.1.
     new 71af4ebe56 gnu: r-xfun: Update to 0.39.
     new f471eb86c3 gnu: r-vctrs: Update to 0.6.2.
     new 20d775f622 gnu: r-tinytex: Update to 0.45.
     new 134b94c432 gnu: r-zip: Update to 2.3.0.
     new 207d51639e gnu: r-rjags: Update to 4-14.
     new 7ae99d8446 gnu: r-nodbi: Update to 0.9.3.
     new 92182dd404 gnu: r-cmplot: Update to 4.3.1.
     new b7047d045d gnu: r-targets: Update to 1.0.0.
     new 9c1797abce gnu: r-th-data: Update to 1.1-2.
     new 0a43d0b919 gnu: r-tmb: Update to 1.9.4.
     new d3c2b0d0e9 gnu: r-fs: Update to 1.6.2.
     new acad588a3c gnu: r-afex: Update to 1.3-0.
     new 26405096ab gnu: r-ouch: Update to 2.19.
     new f290020027 gnu: r-bigrquery: Update to 1.4.2.
     new 7e0db06005 gnu: r-rmpfr: Update to 0.9-2.
     new e7c6893684 gnu: r-longdat: Update to 1.1.1.
     new f10e101b46 gnu: r-epi: Update to 2.47.1.
     new 4112f16267 gnu: r-units: Update to 0.8-2.
     new c3480bb230 gnu: r-s2: Update to 1.1.3.
     new c96ed127f6 gnu: r-batchtools: Update to 0.9.17.
     new 86de3bd06e gnu: r-terra: Update to 1.7-29.
     new a5b43d7ace gnu: r-parameters: Update to 0.21.0.
     new 86fc50f544 gnu: r-rgdal: Update to 1.6-6.
     new 2b3c9a317b gnu: r-snowballc: Update to 0.7.1.
     new 7b80d7e17f gnu: r-rcdd: Update to 1.5-2.
     new 33a3f6e8ea gnu: r-scatterpie: Update to 0.1.9.
     new d016035a93 gnu: r-spatstat-model: Update to 3.2-3.
     new d361061ec8 gnu: r-spatstat: Update to 3.0-5.
     new cf26acef53 gnu: r-yardstick: Update to 1.2.0.
     new dea96222c3 gnu: r-qtl: Update to 1.60.
     new eb374d2302 gnu: r-qtl2: Update to 0.32.
     new a465cb32c2 gnu: r-vroom: Update to 1.6.3.
     new 5ab7f2d65e gnu: r-measurements: Update to 1.5.1.
     new 5ebe950281 gnu: r-mass: Update to 7.3-59.
     new c7950f0f10 gnu: r-microbenchmark: Update to 1.4.10.
     new faff9ff1c3 gnu: r-rlang: Update to 1.1.1.
     new 55bc3815aa gnu: r-dplyr: Update to 1.1.2.
     new 3f106a8604 gnu: r-xml2: Update to 1.3.4.
     new 3f4b0ff490 gnu: r-checkmate: Update to 2.2.0.
     new eda8cd78b1 gnu: r-sfsmisc: Update to 1.1-15.
     new 1d664f404a gnu: r-lme4: Update to 1.1-33.
     new 8b66099722 gnu: r-norm: Update to 1.0-11.0.

The 542 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "add" were already present in the repository and have only
been added to this reference.


Summary of changes:
 gnu/packages/bioconductor.scm   | 2293 +++++++++++++++++++++------------------
 gnu/packages/bioinformatics.scm |    4 +-
 gnu/packages/cran.scm           |  271 +++--
 gnu/packages/java.scm           |   43 +
 gnu/packages/statistics.scm     |   43 +-
 guix/build-system/r.scm         |    4 +-
 guix/import/cran.scm            |    8 +-
 guix/import/pypi.scm            |    4 +-
 8 files changed, 1496 insertions(+), 1174 deletions(-)