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01/02: gnu: Add r-seurat5object.


From: guix-commits
Subject: 01/02: gnu: Add r-seurat5object.
Date: Mon, 8 May 2023 05:54:15 -0400 (EDT)

rekado pushed a commit to branch master
in repository guix.

commit c2a2d40e6d9f0cac3ae9496a6a1b5fb15346b947
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Mon May 8 11:37:01 2023 +0200

    gnu: Add r-seurat5object.
    
    * gnu/packages/cran.scm (r-seurat5object): New variable.
---
 gnu/packages/cran.scm | 31 +++++++++++++++++++++++++++++++
 1 file changed, 31 insertions(+)

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 3c7236581b..53cab3adad 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -34316,6 +34316,37 @@ access methods and R-native hooks to ensure the Seurat 
object is familiar to
 other R users.")
     (license license:gpl3)))
 
+;; This is for r-seurat5
+(define-public r-seurat5object
+  (let ((commit "185884ae527d6ce71cb51d2e84a630030e8439a3")
+        (revision "1"))
+    (package
+      (inherit r-seuratobject)
+      (name "r-seurat5object")
+      (version (git-version "4.9.9.9084" revision commit))
+      (source (origin
+                (method git-fetch)
+                (uri (git-reference
+                      (url "https://github.com/mojaveazure/seurat-object";)
+                      (commit commit)))
+                (file-name (git-file-name name version))
+                (sha256
+                 (base32
+                  "1nbai31gjsgiaazb4jhpqw8h04nm8xd131fng7zcw11kspj54n9z"))
+                ;; This file triggers renv, which we don't want to use.
+                (snippet '(delete-file ".Rprofile"))))
+      (propagated-inputs (list r-future
+                               r-future-apply
+                               r-generics
+                               r-lifecycle
+                               r-matrix
+                               r-progressr
+                               r-rcpp
+                               r-rcppeigen
+                               r-rlang
+                               r-sp
+                               r-spam)))))
+
 (define-public r-seurat
   (package
     (name "r-seurat")



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