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49/79: gnu: Add r-s4arrays.
From: |
guix-commits |
Subject: |
49/79: gnu: Add r-s4arrays. |
Date: |
Tue, 9 May 2023 09:27:14 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 7a58dc01d301cdc3d036bba92c0b9dc27a7fb9bb
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue May 9 14:45:13 2023 +0200
gnu: Add r-s4arrays.
* gnu/packages/bioconductor.scm (r-s4arrays): New variable.
---
gnu/packages/bioconductor.scm | 32 ++++++++++++++++++++++++++++++++
1 file changed, 32 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index c8582bddbb..9ccebec76f 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -18211,6 +18211,38 @@ generated.")
routines.")
(license license:lgpl2.0+)))
+(define-public r-s4arrays
+ (package
+ (name "r-s4arrays")
+ (version "1.0.1")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "S4Arrays" version))
+ (sha256
+ (base32
+ "05nbdz8c2qfkbflbn5acf4bvdb20rj83nb4aii0c5v4zvxxrs3js"))))
+ (properties `((upstream-name . "S4Arrays")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biocgenerics r-crayon r-iranges r-matrix r-s4vectors))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/S4Arrays")
+ (synopsis "Foundation of array-like containers in Bioconductor")
+ (description
+ "The S4Arrays package defines the @code{Array} virtual class to be
+extended by other S4 classes that wish to implement a container with an
+array-like semantic. It also provides:
+
+@enumerate
+@item low-level functionality meant to help the developer of such container to
+ implement basic operations like display, subsetting, or coercion of their
+ array-like objects to an ordinary matrix or array, and
+@item a framework that facilitates block processing of array-like
+ objects (typically on-disk objects).
+@end enumerate
+")
+ (license license:artistic2.0)))
+
(define-public r-s4vectors
(package
(name "r-s4vectors")
- 54/79: gnu: r-delayedarray: Update to 0.26.2., (continued)
- 54/79: gnu: r-delayedarray: Update to 0.26.2., guix-commits, 2023/05/09
- 55/79: gnu: r-densvis: Update to 1.10.1., guix-commits, 2023/05/09
- 61/79: gnu: r-impute: Update to 1.74.1., guix-commits, 2023/05/09
- 66/79: gnu: r-oligo: Update to 1.64.1., guix-commits, 2023/05/09
- 01/79: gnu: apache-arrow: Use G-expressions., guix-commits, 2023/05/09
- 06/79: gnu: r-biomartr: Update to 1.0.3., guix-commits, 2023/05/09
- 10/79: gnu: r-httpuv: Update to 1.6.10., guix-commits, 2023/05/09
- 21/79: gnu: r-wk: Update to 0.7.3., guix-commits, 2023/05/09
- 29/79: gnu: r-metafor: Update to 4.2-0., guix-commits, 2023/05/09
- 30/79: gnu: r-scattermore: Update to 1.0., guix-commits, 2023/05/09
- 49/79: gnu: Add r-s4arrays.,
guix-commits <=
- 48/79: gnu: r-deoptimr: Update to 1.0-13., guix-commits, 2023/05/09
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- 67/79: gnu: r-glmgampoi: Update to 1.12.1., guix-commits, 2023/05/09
- 69/79: gnu: r-dnacopy: Update to 1.74.1., guix-commits, 2023/05/09
- 70/79: gnu: r-linnorm: Update to 2.24.1., guix-commits, 2023/05/09
- 71/79: gnu: r-dose: Update to 3.26.1., guix-commits, 2023/05/09
- 72/79: gnu: r-clusterprofiler: Update to 4.8.1., guix-commits, 2023/05/09
- 74/79: gnu: r-preprocesscore: Update to 1.62.1., guix-commits, 2023/05/09
- 79/79: gnu: r-scran: Update to 1.28.1., guix-commits, 2023/05/09
- 78/79: gnu: r-scuttle: Update to 1.10.1., guix-commits, 2023/05/09