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140/174: gnu: r-ancombc: Update to 2.2.1.
From: |
guix-commits |
Subject: |
140/174: gnu: r-ancombc: Update to 2.2.1. |
Date: |
Tue, 11 Jul 2023 14:48:43 -0400 (EDT) |
rekado pushed a commit to branch r-updates
in repository guix.
commit cfaa45b8371cafe0530fe9971a9a2e5524be7ac9
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Jul 11 20:16:53 2023 +0200
gnu: r-ancombc: Update to 2.2.1.
* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.2.1.
[propagated-inputs]: Remove r-dplyr, r-emmeans, r-magrittr, r-rlang,
r-rngtools,
r-tibble, and r-tidyr; add r-gtools, r-matrix, and r-multcomp.
---
gnu/packages/bioconductor.scm | 14 +++++---------
1 file changed, 5 insertions(+), 9 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 912946d974..58b8952bc4 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2859,13 +2859,13 @@ analysis, modelling, and visualization of spike-in
controls.")
(define-public r-ancombc
(package
(name "r-ancombc")
- (version "2.2.0")
+ (version "2.2.1")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "ANCOMBC" version))
(sha256
(base32
- "1wfbi8xyh2pxpjdv2zhml2l1h8c7fyfl5wyici3nm3rcs00n7m9w"))))
+ "05gngz6cqihxg4zlf7ymw93qj61a1i19hgp4fkc0cxnkq0pambrd"))))
(properties `((upstream-name . "ANCOMBC")))
(build-system r-build-system)
(propagated-inputs
@@ -2873,25 +2873,21 @@ analysis, modelling, and visualization of spike-in
controls.")
r-desctools
r-doparallel
r-dorng
- r-dplyr
- r-emmeans
r-energy
r-foreach
+ r-gtools
r-hmisc
r-lme4
r-lmertest
- r-magrittr
r-mass
+ r-matrix
r-mia
+ r-multcomp
r-nloptr
r-rdpack
- r-rlang
- r-rngtools
r-s4vectors
r-singlecellexperiment
r-summarizedexperiment
- r-tibble
- r-tidyr
r-treesummarizedexperiment))
(native-inputs (list r-knitr))
(home-page "https://github.com/FrederickHuangLin/ANCOMBC")
- 160/174: gnu: r-glmgampoi: Update to 1.12.2., (continued)
- 160/174: gnu: r-glmgampoi: Update to 1.12.2., guix-commits, 2023/07/11
- 171/174: gnu: r-basilisk: Update to 1.12.1., guix-commits, 2023/07/11
- 75/174: gnu: r-polspline: Update to 1.1.23., guix-commits, 2023/07/11
- 84/174: gnu: r-r-huge: Update to 0.10.0., guix-commits, 2023/07/11
- 100/174: gnu: r-downlit: Update to 0.4.3., guix-commits, 2023/07/11
- 102/174: gnu: r-intervals: Update to 0.15.4., guix-commits, 2023/07/11
- 97/174: gnu: r-scattermore: Update to 1.2., guix-commits, 2023/07/11
- 121/174: gnu: r-testthat: Update to 3.1.10., guix-commits, 2023/07/11
- 123/174: gnu: r-locfit: Update to 1.5-9.8., guix-commits, 2023/07/11
- 129/174: gnu: r-deoptimr: Update to 1.0-14., guix-commits, 2023/07/11
- 140/174: gnu: r-ancombc: Update to 2.2.1.,
guix-commits <=
- 168/174: gnu: r-fishpond: Update to 2.6.2., guix-commits, 2023/07/11
- 146/174: gnu: r-affy: Update to 1.78.1., guix-commits, 2023/07/11
- 151/174: gnu: r-deseq2: Update to 1.40.2., guix-commits, 2023/07/11
- 142/174: gnu: r-bambu: Update to 3.2.5., guix-commits, 2023/07/11
- 111/174: gnu: r-paws-analytics: Update to 0.3.0., guix-commits, 2023/07/11
- 138/174: gnu: Add r-saturn., guix-commits, 2023/07/11
- 155/174: gnu: r-maaslin2: Update to 1.14.1., guix-commits, 2023/07/11
- 162/174: gnu: r-motifbreakr: Update to 2.14.2., guix-commits, 2023/07/11
- 163/174: gnu: r-quasr: Update to 1.40.1., guix-commits, 2023/07/11
- 154/174: gnu: r-limma: Update to 3.56.2., guix-commits, 2023/07/11