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branch master updated: gnu: Add r-mousegastrulationdata.
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guix-commits |
Subject: |
branch master updated: gnu: Add r-mousegastrulationdata. |
Date: |
Mon, 28 Aug 2023 04:20:22 -0400 |
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rekado pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new cf941786ee gnu: Add r-mousegastrulationdata.
cf941786ee is described below
commit cf941786eea468e28977437b881d84c2c2a66e66
Author: Navid Afkhami <navid.afkhami@mdc-berlin.de>
AuthorDate: Thu Aug 24 13:28:28 2023 +0000
gnu: Add r-mousegastrulationdata.
* gnu/packages/bioconductor.scm (r-mousegastrulationdata): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
---
gnu/packages/bioconductor.scm | 31 +++++++++++++++++++++++++++++++
1 file changed, 31 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1b62837bbc..0e01f3115d 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1708,6 +1708,37 @@ gene expression indicate a role for enhancer priming in
immune response\", publi
in Nature Genetics, January 2018.")
(license license:gpl2+)))
+(define-public r-mousegastrulationdata
+ (package
+ (name "r-mousegastrulationdata")
+ (version "1.14.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "MouseGastrulationData" version
+ 'experiment))
+ (sha256
+ (base32
+ "155kci5isq7mlbvv8mdl2jjpafm3pbv1likhls70aa746spr1h17"))))
+ (properties `((upstream-name . "MouseGastrulationData")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-biocgenerics
+ r-bumpymatrix
+ r-experimenthub
+ r-s4vectors
+ r-singlecellexperiment
+ r-spatialexperiment
+ r-summarizedexperiment))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/MarioniLab/MouseGastrulationData")
+ (synopsis
+ "Single-Cell omics data across mouse gastrulation and early
organogenesis")
+ (description
+ "This package provides processed and raw count data for single-cell RNA
+sequencing. In addition, this package offers single-cell ATAC-seq, and
+@code{seqFISH} (spatial transcriptomic) experiments performed along a
+timecourse of mouse gastrulation and early organogenesis.")
+ (license license:gpl3)))
+
(define-public r-minfidata
(package
(name "r-minfidata")
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