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branch master updated: gnu: python-baltica: Add missing R inputs.


From: guix-commits
Subject: branch master updated: gnu: python-baltica: Add missing R inputs.
Date: Tue, 31 Oct 2023 17:04:21 -0400

This is an automated email from the git hooks/post-receive script.

rekado pushed a commit to branch master
in repository guix.

The following commit(s) were added to refs/heads/master by this push:
     new b963bf6b1d gnu: python-baltica: Add missing R inputs.
b963bf6b1d is described below

commit b963bf6b1debe0f73c5d88452fa23a3954fc3cad
Author: Afkhami, Navid <Navid.Afkhami@mdc-berlin.de>
AuthorDate: Tue Oct 31 14:01:22 2023 +0000

    gnu: python-baltica: Add missing R inputs.
    
    * gnu/packages/bioinformatics.scm (python-baltica)[propagated-inputs]: Add
    r-biocmanager, r-dplyr, r-genomicranges, r-here, r-openxlsx, r-optparse,
    r-readr, r-rsamtools, r-stringr, r-tidyr, r-upsetr, and r-yaml.
    [description]: Add an extra space after a period.
    
    Change-Id: I8c1bb556048b406b95e081155a46da17a6be5676
---
 gnu/packages/bioinformatics.scm | 14 +++++++++++++-
 1 file changed, 13 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index a47e84bc33..3a4bcd093a 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -5164,13 +5164,25 @@ software to answer ad hoc questions.")
            python-pysam
            python-pyyaml
            python-scipy
+           r-biocmanager
+           r-dplyr
+           r-genomicranges
+           r-here
+           r-openxlsx
+           r-optparse
+           r-readr
+           r-rsamtools
+           r-stringr
+           r-tidyr
+           r-upsetr
+           r-yaml
            snakemake-7))
     (native-inputs (list python-cython python-pyfakefs python-pytest))
     (home-page "https://github.com/dieterich-lab/Baltica";)
     (synopsis "Integrated splice junction usage analysis")
     (description
      "This framework facilitates the execution of @dfn{differential junction
-usage} (DJU) methods. Additionally, it enables the integration of results from
+usage} (DJU) methods.  Additionally, it enables the integration of results from
 multiple DJU methods.")
     (license license:expat)))
 



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