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branch master updated: gnu: Add r-miamiplot.
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guix-commits |
Subject: |
branch master updated: gnu: Add r-miamiplot. |
Date: |
Fri, 03 Nov 2023 09:11:22 -0400 |
This is an automated email from the git hooks/post-receive script.
rekado pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new c9361460de gnu: Add r-miamiplot.
c9361460de is described below
commit c9361460dece1dbc3d2645ad3e5c79e85a2bf183
Author: Afkhami, Navid <Navid.Afkhami@mdc-berlin.de>
AuthorDate: Fri Nov 3 13:05:29 2023 +0000
gnu: Add r-miamiplot.
* gnu/packages/bioinformatics.scm (r-miamiplot): New variable.
Change-Id: I41a3a951c6f1835800301e4c168eeeb0dd299f06
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
---
gnu/packages/bioinformatics.scm | 34 ++++++++++++++++++++++++++++++++++
1 file changed, 34 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 3a4bcd093a..baa990970c 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10665,6 +10665,40 @@ of transcriptional heterogeneity among single cells.")
;; See https://github.com/hms-dbmi/scde/issues/38
(license license:gpl2)))
+(define-public r-miamiplot
+ (let ((commit "beede9c5d6431b4d822aa42e064e01baeb5dd4a0")
+ (revision "1"))
+ (package
+ (name "r-miamiplot")
+ (version (git-version "1.1.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/juliedwhite/miamiplot")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0wxxk1lk9jbf0imf59qp302ffasvs84idinkvzirs3dw9w3589n9"))))
+ (properties `((upstream-name . "miamiplot")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-checkmate
+ r-dplyr
+ r-ggplot2
+ r-ggrepel
+ r-gridextra
+ r-magrittr
+ r-rlang))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/juliedwhite/miamiplot")
+ (synopsis "Create a ggplot2 miami plot")
+ (description
+ "This package generates a Miami plot with centered chromosome labels.
+The output is a ggplot2 object. Users can specify which data they want
+plotted on top vs. bottom, whether to display significance line(s), what
+colors to give chromosomes, and what points to label.")
+ (license license:gpl2))))
+
(define-public r-millefy
(package
(name "r-millefy")
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