branch r-updates updated: gnu: r-rhdf5filters: Simplify.

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rekado pushed a commit to branch r-updates
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The following commit(s) were added to refs/heads/r-updates by this push:
     new ff82f6a34c gnu: r-rhdf5filters: Simplify.
ff82f6a34c is described below

commit ff82f6a34c62d6f15fd2deb41139ff7b43204be6
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Fri Nov 3 19:44:57 2023 +0100

    gnu: r-rhdf5filters: Simplify.
    
    * gnu/packages/bioconductor.scm (r-rhdf5filters)[arguments]: Remove
    'use-system-libraries phase and pass configure flags to disable bundled
    libraries.
    
    Change-Id: I2fb115e7b3df00cccb3f8d6659d465075d21f19b
---
 gnu/packages/bioconductor.scm | 20 ++------------------
 1 file changed, 2 insertions(+), 18 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index a92f187a95..1d87325a7e 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9688,24 +9688,8 @@ the available RAM.")
     (build-system r-build-system)
     (arguments
      (list
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-after 'unpack 'use-system-libraries
-            (lambda _
-              (substitute* "src/blosc/Makefile.in"
-                (("libblosc.a: blosc") "libwhatever.a:")
-                (("libblosc.a")
-                 (string-append #$(this-package-input "c-blosc")
-                                "/lib/libblosc.so"))
-                (("../zstd/libzstd.a") "-lzstd"))
-              (substitute* "src/bzip2/Makefile"
-                (("libH5Zbz2.so: bzip2-1.0.8/libbz2.a") "libH5Zbz2.so:")
-                (("./bzip2-1.0.8/libbz2.a") "-lbz2"))
-              (substitute* "src/zstd/Makefile"
-                (("libH5Zzstd.so: libzstd.a") "libH5Zzstd.so:")
-                (("libzstd.a") "-lzstd"))
-              (substitute* "src/vbz/Makefile"
-                (("../zstd/libzstd.a") "-lzstd")))))))
+      #:configure-flags
+      '(list "--without-bundled-libs")))
     (propagated-inputs
      (list r-rhdf5lib))
     (inputs