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01/03: gnu: Remove r-sigpathway.
From: |
guix-commits |
Subject: |
01/03: gnu: Remove r-sigpathway. |
Date: |
Fri, 3 Nov 2023 16:49:53 -0400 (EDT) |
rekado pushed a commit to branch r-updates
in repository guix.
commit af3d6500cfc3f8aae27d3bb14125d43f83409bf6
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Fri Nov 3 21:15:12 2023 +0100
gnu: Remove r-sigpathway.
This package has been removed with the release of Bioconductor 3.18.
* gnu/packages/bioconductor.scm (r-sigpathway): Remove variable.
Change-Id: I5cb9d938f370aa28b196f9cea95fb6024c2e6e37
---
gnu/packages/bioconductor.scm | 22 ----------------------
1 file changed, 22 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1d87325a7e..523b7e7ee9 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -14736,28 +14736,6 @@ mRNA levels or buffering, a mechanism regulating
translational efficiency so
that protein levels remain constant despite fluctuating total mRNA levels.")
(license license:gpl3)))
-(define-public r-sigpathway
- (package
- (name "r-sigpathway")
- (version "1.66.2")
- (source
- (origin
- (method url-fetch)
- (uri (bioconductor-uri "sigPathway" version))
- (sha256
- (base32
- "0k86hlz7zbbw7559bd2sl59pr441kihgwvg8nr75mj8d50n783sy"))))
- (properties `((upstream-name . "sigPathway")))
- (build-system r-build-system)
- (home-page "https://www.pnas.org/cgi/doi/10.1073/pnas.0506577102")
- (synopsis "Pathway analysis")
- (description
- "This package is used to conduct pathway analysis by calculating the NT_k
-and NE_k statistics in a statistical framework for determining whether a
-specified group of genes for a pathway has a coordinated association with a
-phenotype of interest.")
- (license license:gpl2)))
-
(define-public r-fcscan
(package
(name "r-fcscan")