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branch master updated: gnu: Add r-rnbeads.


From: guix-commits
Subject: branch master updated: gnu: Add r-rnbeads.
Date: Sat, 04 Nov 2023 12:10:31 -0400

This is an automated email from the git hooks/post-receive script.

rekado pushed a commit to branch master
in repository guix.

The following commit(s) were added to refs/heads/master by this push:
     new 58786c82df gnu: Add r-rnbeads.
58786c82df is described below

commit 58786c82df700fb1f1c30022ee6ec0b2e7516e7b
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Fri Nov 3 16:11:05 2023 +0100

    gnu: Add r-rnbeads.
    
    * gnu/packages/bioconductor.scm (r-rnbeads): New variable.
    
    Change-Id: I78b248a449473fc37ac414295faa6e61269b8625
    Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
---
 gnu/packages/bioconductor.scm | 36 ++++++++++++++++++++++++++++++++++++
 1 file changed, 36 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 38f9ce64ab..0d4a27981c 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8169,6 +8169,42 @@ nucleotide sequence analysis.  The package is primarily 
useful to developers
 of other R packages who wish to make use of HTSlib.")
     (license license:lgpl2.0+)))
 
+(define-public r-rnbeads
+  (package
+    (name "r-rnbeads")
+    (version "2.20.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "RnBeads" version))
+       (sha256
+        (base32 "15z7l4nmpy01xm19717l27nwf3rfsn6wjv211fn2y4ls40mz75qp"))))
+    (properties `((upstream-name . "RnBeads")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-biocgenerics
+           r-cluster
+           r-ff
+           r-fields
+           r-genomicranges
+           r-ggplot2
+           r-gplots
+           r-gridextra
+           r-illuminaio
+           r-iranges
+           r-limma
+           r-mass
+           r-matrixstats
+           r-methylumi
+           r-plyr
+           r-s4vectors))
+    (home-page "https://bioconductor.org/packages/RnBeads";)
+    (synopsis "RnBeads")
+    (description
+     "@code{RnBeads} facilitates comprehensive analysis of various types of DNA
+methylation data at the genome scale.")
+    (license license:gpl3)))
+
 (define-public r-impute
   (package
     (name "r-impute")



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