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branch master updated: gnu: Add r-rnbeads.
From: |
guix-commits |
Subject: |
branch master updated: gnu: Add r-rnbeads. |
Date: |
Sat, 04 Nov 2023 12:10:31 -0400 |
This is an automated email from the git hooks/post-receive script.
rekado pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new 58786c82df gnu: Add r-rnbeads.
58786c82df is described below
commit 58786c82df700fb1f1c30022ee6ec0b2e7516e7b
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Fri Nov 3 16:11:05 2023 +0100
gnu: Add r-rnbeads.
* gnu/packages/bioconductor.scm (r-rnbeads): New variable.
Change-Id: I78b248a449473fc37ac414295faa6e61269b8625
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
---
gnu/packages/bioconductor.scm | 36 ++++++++++++++++++++++++++++++++++++
1 file changed, 36 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 38f9ce64ab..0d4a27981c 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8169,6 +8169,42 @@ nucleotide sequence analysis. The package is primarily
useful to developers
of other R packages who wish to make use of HTSlib.")
(license license:lgpl2.0+)))
+(define-public r-rnbeads
+ (package
+ (name "r-rnbeads")
+ (version "2.20.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "RnBeads" version))
+ (sha256
+ (base32 "15z7l4nmpy01xm19717l27nwf3rfsn6wjv211fn2y4ls40mz75qp"))))
+ (properties `((upstream-name . "RnBeads")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biocgenerics
+ r-cluster
+ r-ff
+ r-fields
+ r-genomicranges
+ r-ggplot2
+ r-gplots
+ r-gridextra
+ r-illuminaio
+ r-iranges
+ r-limma
+ r-mass
+ r-matrixstats
+ r-methylumi
+ r-plyr
+ r-s4vectors))
+ (home-page "https://bioconductor.org/packages/RnBeads")
+ (synopsis "RnBeads")
+ (description
+ "@code{RnBeads} facilitates comprehensive analysis of various types of DNA
+methylation data at the genome scale.")
+ (license license:gpl3)))
+
(define-public r-impute
(package
(name "r-impute")
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