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branch master updated: gnu: Add r-polyester.


From: guix-commits
Subject: branch master updated: gnu: Add r-polyester.
Date: Mon, 11 Dec 2023 00:28:05 -0500

This is an automated email from the git hooks/post-receive script.

rekado pushed a commit to branch master
in repository guix.

The following commit(s) were added to refs/heads/master by this push:
     new 9535cee6cd gnu: Add r-polyester.
9535cee6cd is described below

commit 9535cee6cdf259f898fae043564038f53a809a9e
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Thu Nov 30 13:20:05 2023 +0100

    gnu: Add r-polyester.
    
    * gnu/packages/bioconductor.scm (r-polyester): New variable.
    
    Change-Id: I415089cda3214ec04402fc6f4505fa868414d0e2
    Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
---
 gnu/packages/bioconductor.scm | 28 ++++++++++++++++++++++++++++
 1 file changed, 28 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 7ff364ee55..4f15213481 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9592,6 +9592,34 @@ package contains functions for combining the results of 
multiple runs of gene
 set analyses.")
     (license license:gpl2+)))
 
+(define-public r-polyester
+  (package
+    (name "r-polyester")
+    (version "1.38.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "polyester" version))
+       (sha256
+        (base32 "1iycdxj0jhh2faclfzflp2cjc2zmxmhy03avv75h0qg3j5kf35l4"))))
+    (properties `((upstream-name . "polyester")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-biostrings
+           r-iranges
+           r-limma
+           r-logspline
+           r-s4vectors
+           r-zlibbioc))
+    (native-inputs (list r-knitr))
+    (home-page "https://bioconductor.org/packages/polyester";)
+    (synopsis "Simulate RNA-seq reads")
+    (description
+     "The polyester package simulates RNA-seq reads from differential 
expression
+experiments with replicates.  The reads can then be aligned and used to perform
+comparisons of methods for differential expression.")
+    (license license:artistic2.0)))
+
 (define-public r-powertcr
   (package
     (name "r-powertcr")



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