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15/15: gnu: Add python-ripser.
From: |
guix-commits |
Subject: |
15/15: gnu: Add python-ripser. |
Date: |
Tue, 9 Jan 2024 04:30:06 -0500 (EST) |
mothacehe pushed a commit to branch master
in repository guix.
commit a1a645337a76cf5fb55d20ee694fcb6a52fcf11b
Author: Troy Figiel <troy@troyfigiel.com>
AuthorDate: Sat Nov 18 22:54:35 2023 +0100
gnu: Add python-ripser.
* gnu/packages/machine-learning.scm (python-ripser): New variable.
Change-Id: I21b42e555a5017e68cf43a6eaa19d991db36723d
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
---
gnu/packages/machine-learning.scm | 28 ++++++++++++++++++++++++++++
1 file changed, 28 insertions(+)
diff --git a/gnu/packages/machine-learning.scm
b/gnu/packages/machine-learning.scm
index 67a8041f72..1616738399 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -873,6 +873,34 @@ It currently houses implementations of
")
(license license:expat))) ; MIT License
+(define-public python-ripser
+ (package
+ (name "python-ripser")
+ (version "0.6.4")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "ripser" version))
+ (sha256
+ (base32 "1575nwsn6b29z7w1mjk23ri83bxq2b4ld979hpgm174642a3x6vs"))))
+ (build-system pyproject-build-system)
+ (propagated-inputs (list python-numpy python-persim python-scikit-learn
+ python-scipy))
+ (native-inputs (list python-cython python-pytest))
+ (home-page "https://ripser.scikit-tda.org")
+ (synopsis "Persistent homology library for Python")
+ (description
+ "This package implements a variety of persistent homology algorithms. It
+provides an interface for
+@itemize
+@item computing persistence cohomology of sparse and dense data sets
+@item visualizing persistence diagrams
+@item computing lowerstar filtrations on images
+@item computing representative cochains
+@end itemize
+")
+ (license license:expat))) ; MIT License
+
(define-public python-sacrebleu
(package
(name "python-sacrebleu")
- 09/15: gnu: python-h5py: Enable tests., (continued)
- 09/15: gnu: python-h5py: Enable tests., guix-commits, 2024/01/09
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- 10/15: gnu: python-h5py: Reformat with guix style., guix-commits, 2024/01/09
- 14/15: gnu: Add python-persim., guix-commits, 2024/01/09
- 02/15: gnu: Add python-hdf5storage., guix-commits, 2024/01/09
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- 11/15: gnu: Add python-pyreadstat., guix-commits, 2024/01/09
- 13/15: gnu: Add python-hopcroftkarp., guix-commits, 2024/01/09
- 15/15: gnu: Add python-ripser.,
guix-commits <=
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