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03/04: gnu: samtools: Update to 1.19.
From: |
guix-commits |
Subject: |
03/04: gnu: samtools: Update to 1.19. |
Date: |
Tue, 16 Jan 2024 13:37:20 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit e0369ba57dd532290a4057113f5ae9a7a8feff86
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Jan 16 19:31:35 2024 +0100
gnu: samtools: Update to 1.19.
* gnu/packages/bioinformatics.scm (samtools): Update to 1.19.
[source]: Simplify snippet.
Change-Id: If0e02bbbc8e0443eb418c078dc47525f432d7ebe
---
gnu/packages/bioinformatics.scm | 14 +++++++-------
1 file changed, 7 insertions(+), 7 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 7ddf6e1afc..b4b848c0c0 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8484,20 +8484,20 @@ to the user's query of interest.")
(define-public samtools
(package
(name "samtools")
- (version "1.14")
+ (version "1.19")
(source
(origin
(method url-fetch)
(uri
- (string-append "mirror://sourceforge/samtools/samtools/"
- version "/samtools-" version ".tar.bz2"))
+ (string-append "https://github.com/samtools/samtools"
+ "/releases/download/" version
+ "/samtools-" version ".tar.bz2"))
(sha256
(base32
- "0x3xdda78ac5vx66b3jdsv9sfhyz4npl4znl1zbaf3lbm6xdlhck"))
+ "10wby07w33rfypy4kf73v9wwnbyh0lrazbsmrgrvcl88w8c3nszs"))
(modules '((guix build utils)))
- (snippet '(begin
- ;; Delete bundled htslib.
- (delete-file-recursively "htslib-1.14")))))
+ ;; Delete bundled htslib.
+ (snippet '(delete-file-recursively "htslib-1.19"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags (list "--with-ncurses")