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Re: [help-gnuastro] GNU Astro configure error - missing WCSLIB component
From: |
Duane Booher |
Subject: |
Re: [help-gnuastro] GNU Astro configure error - missing WCSLIB component |
Date: |
Fri, 25 May 2018 20:34:13 +0000 |
Hi Mohammad,
It looks like we have a build/install completed with one final 'make check'
error. We have gone ahead and are doing some cursory testing.
Is this error below anything to be concerned with?
Make check:
FAIL: buildprog/simpleio.sh
Then I run:
tests/buildprog/simpleio.sh
../bin/buildprog/astbuildprog not created.
The actual make of bin/buildprog appeared to be clean.
Thanks again, your support has been awesome.
Duane
On 5/25/18, 11:35 AM, "Mohammad Akhlaghi" <address@hidden> wrote:
No problem, I am happy we are making good progress.
You need to link with the proper CFITSIO library also, similar to
WCSLIB, with this configure command:
./configure --prefix=/packages/gnuastro/0.5
LDFLAGS="-L/packages/wcslib/5.18/lib -L/packages/cfitsio/3.410/lib"
CPPFLAGS="-I/packages/wcslib/5.18/include -I/packages/cfitsio/3.410/include"
`fffree' is a function in CFITSIO. Since you now include the CFITSIO
headers (with `-I/packages/cfitsio/3.410/include'), it was able to
compile the Gnuastro's Arithmetic program (which is the program causing
the crash). But when it wanted to link it with the CFITSIO library, it
couldn't. The new `-L/packages/cfitsio/3.410/lib' linker option will fix
the problem.
By the way, if your HPC system has more than 8 threads, you can use a
larger number in `make -jN' (N being any number larger than 1) to speed
up the build. In Make, `j' stands for "job", it means the maximum number
of jobs to run in parallel at any moment.
Hopefully there shouldn't be any more problems.
Cheers,
Mohammad
- [help-gnuastro] GNU Astro configure error - missing WCSLIB component, Duane Booher, 2018/05/25
- Re: [help-gnuastro] GNU Astro configure error - missing WCSLIB component, Mohammad Akhlaghi, 2018/05/25
- Re: [help-gnuastro] GNU Astro configure error - missing WCSLIB component, Duane Booher, 2018/05/25
- Re: [help-gnuastro] GNU Astro configure error - missing WCSLIB component, Duane Booher, 2018/05/25
- Re: [help-gnuastro] GNU Astro configure error - missing WCSLIB component, Mohammad Akhlaghi, 2018/05/25
- Re: [help-gnuastro] GNU Astro configure error - missing WCSLIB component, Duane Booher, 2018/05/25
- Re: [help-gnuastro] GNU Astro configure error - missing WCSLIB component, Mohammad Akhlaghi, 2018/05/25
- Re: [help-gnuastro] GNU Astro configure error - missing WCSLIB component, Duane Booher, 2018/05/25
- Re: [help-gnuastro] GNU Astro configure error - missing WCSLIB component, Mohammad Akhlaghi, 2018/05/25
- Re: [help-gnuastro] GNU Astro configure error - missing WCSLIB component,
Duane Booher <=
- Re: [help-gnuastro] GNU Astro configure error - missing WCSLIB component, Mohammad Akhlaghi, 2018/05/25
- Re: [help-gnuastro] GNU Astro configure error - missing WCSLIB component, Mohammad Akhlaghi, 2018/05/25