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bug#18121: A bug in sort.


From: Tom Bryant
Subject: bug#18121: A bug in sort.
Date: Sun, 27 Jul 2014 20:05:42 -0400
User-agent: Mozilla/5.0 (X11; U; Linux x86_64; en-US; rv:1.9.1.9) Gecko/20100401 Thunderbird/3.0.4

I issued a "sort -n hugeFile > sortedHugeFile" and it introduced a very occasional but destructive "x" in to the data.

The original data consisted of numeric fields, separated by the vertical bar, "|", and +, - and spaces. It was 25861964610 bytes in size.

The final file had around 10 "x" characters overwritten in it. It too was 25861964610 bytes in size. I copy the first few lines to give you an idea of what sort was sorting:

0.01996377896414875189|-1.56937596815334989842|13950|13860|9|0|0|146|158|8|6|2|9697|59367|119|65406|159|161|1101364107|12467|12131|11963|5|5|5|2|3|3|20000|20000|20000|20000|20000|99|99|99|99|99|3|1|0|0|1000076|1|2|1 1 0.05686181376938173604|-1.56865877357861105423|14858|14817|7|0|0|158|160|6|6|2|9584|16962|42|65512|167|167|1229086934|12870|12167|12014|5|5|5|2|2|2|20000|20000|20000|20000|20000|99|99|99|99|99|3|1|0|0|1000185|1|7|1 2 0.08867460878463592766|-1.56748967932357308186|10400|10375|2|0|0|141|140|8|8|5|9290|56797|26|36|141|139|1181024763|7516|6675|6389|5|5|5|2|3|3|13182|10986|20000|20000|20000|99|99|99|99|99|2|310000001|0|0|1000431|1|10|1 3 0.13659213373632231314|-1.56927658619685916896|14012|13924|9|0|0|151|148|8|8|2|9611|52428|153|65530|160|159|1127037907|12431|12038|11937|5|5|5|2|3|3|20000|20000|20000|20000|20000|99|99|99|99|99|3|1|0|0|1000084|1|14|1 4 0.15088146914756625505|-1.57030633530367280670|16079|16329|99|5|0|223|226|1|1|1|9874|37522|0|0|127|127|1085342271|15299|14894|14657|25|25|26|7|10|13|20000|20000|20000|20000|20000|99|99|99|99|99|0|0|0|0|1000007|0|0|1 5 0.17178172876255659585|-1.56903360727616081327|13032|12989|5|0|0|148|145|8|8|2|9647|57825|126|0|157|157|1085364212|11087|10514|10353|5|5|5|2|3|3|20000|20000|20000|20000|20000|99|99|99|99|99|3|1|0|0|1000121|1|24|1 6 0.18379604688637316001|-1.56836539827576126882|15692|16287|39|0|0|195|200|2|2|2|9341|13621|65514|2|197|198|1085364149|14738|14268|13997|5|5|5|3|6|7|20000|20000|20000|20000|20000|99|99|99|99|99|4|1|0|0|1000243|0|0|1 7

The data, FWIW, is an ASCII representation of the UCAC4 star catalog.

Here is an example of a record with the "x" added to it by sort:
                                                                                
                                   V
2.04433377497687374102|0.22403821980488977661|16454|20000|99|1|0|23x24|1|1|2|8603|20560|141|65324|192|191|111893392|14129|13386|13099|25|2|2|4|99|99|20000|20000|20000|20000|20000|99|99|99|99|99|0|30|0|0|118728360|0|0|515 44588

I still have the original and flawed sort if you're interested.

The computer this error occured on was a 16Gb machine with a 2TB drive and an Intel Quad core processor running Slackware Linux 13.0.

Tom




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