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Re: PSPP-BUG: Bug Report for PSPP 0.7.8 on Fedora
From: |
Ben Pfaff |
Subject: |
Re: PSPP-BUG: Bug Report for PSPP 0.7.8 on Fedora |
Date: |
Sat, 03 Mar 2012 08:32:27 -0800 |
User-agent: |
Gnus/5.13 (Gnus v5.13) Emacs/23.2 (gnu/linux) |
Eliana <address@hidden> writes:
> this is a bug report, running pspp 0.7.8 on Fedora 12. Tried running
> QUICK CLUSTER
>
> input program and sample data file are attached.
>
> ran from command line with
>
> cat testprogram.txt | pspp
When I run this as provided, with the latest PSPP from the Git
repository, I get the following, without such a report.
What full output do you get?
----------------------------------------------------------------------
cb-me-20120221sorted-1.csv:1.16-1.25: warning: Data for variable CHROM is not
valid as format F: Field contents are not numeric.
cb-me-20120221sorted-1.csv:1.27-1.40: warning: Data for variable START is not
valid as format F: Field contents are not numeric.
cb-me-20120221sorted-1.csv:1.42-1.53: warning: Data for variable STOP is not
valid as format F: Field contents are not numeric.
cb-me-20120221sorted-1.csv:1.55-1.66: warning: Data for variable SIZE is not
valid as format F: Field contents are not numeric.
cb-me-20120221sorted-1.csv:1.68-1.80: warning: Data for variable SNPS is not
valid as format F: Field contents are not numeric.
Valid cases = 10; cases with missing value(s) = 1.
+--------#-+--------+--------+--------+--------+--------+----+--------+----+
|Variable#N| Mean | S.E. | Std Dev|Variance|Kurtosis|S.E.|Skewness|S.E.|
| # | | Mean | | | |Kurt| |Skew|
#========#=#========#========#========#========#========#====#========#====#
|CHROM #9| 1.00| .00| .00| .00| .| .| .| .|
| # | | | | | | | | |
|START #9|83697338|21697219|65091658|4.2E+015| -.38|1.40| 1.01| .72|
|STOP #9|86437786|21788956|65366868|4.3E+015| -.36|1.40| 1.01| .72|
|SIZE #9| 2.35| .44| 1.31| 1.73| 7.25|1.40| 2.60| .72|
|SNPS #9| 666.67| 83.33| 250.00|62500.00| 6.62|1.40| 2.46| .72|
+--------#-+--------+--------+--------+--------+--------+----+--------+----+
+--------#--------+--------+--------+--------+
|Variable# Range | Minimum| Maximum| Sum |
| # | | | |
#========#========#========#========#========#
|CHROM # .00| 1.00| 1.00| 9.00|
| # | | | |
|START #1.7E+008|20275685|1.9E+008|7.5E+008|
|STOP #1.7E+008|21826023|2.0E+008|7.8E+008|
|SIZE # 4.31| 1.42| 5.73| 21.18|
|SNPS # 800.00| 500.00| 1300.00| 6000.00|
+--------#--------+--------+--------+--------+
Final Cluster Centers
#=====#==================#
# | Cluster #
# +--------+---------#
# | 1 | 2 #
# +--------+---------#
#START|27491087|111800463#
#STOP |29785241|114764058#
#SIZE | 2.06 | 2.50 #
#SNPS | 567 | 717 #
#=====#========#=========#
Number of Cases in each Cluster
#=======#=#=#
#Cluster|1|3#
# |2|6#
# | | #
# | | #
#Valid | |9#
#=======#=#=#
testprogram.txt:18.30: error: FREQUENCIES: Syntax error at `-': expecting end
of command.
testprogram.txt:23.30: error: EXAMINE: Syntax error at `-': expecting end of
command.
--
Ben Pfaff
http://benpfaff.org