RE: confiig.guess problem

[Van Nam Hoang]

Thanks,
I have updated the config.guess and config.sub, and was able to run ./configure.
However it gave me the message as follows. And I can run make (error 2, and 
error 5).
Could you give me some advices on this?


./CONFIGURE
-----------------------------------------
/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/corelib/ncbicfg.c
 is updated
Prebuilt project_tree_builder not found
===============================================================================
NCBI C++ Toolkit documentation:  doc/index.html,  doc/config.html#ref_Running
For the available configuration flags run:  ./configure --help

CFLAGS   =  -Wall -Wno-format-y2k   -O2
CXXFLAGS =  -Wall -Wno-format-y2k   -O2
CPPFLAGS = -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE 
-D_FILE_OFFSET_BITS=64  -D_MT -D_REENTRANT -D_THREAD_SAFE
LDFLAGS  =  -Wl,-rpath,/usr/lib/gcc/x86_64-pc-cygwin/4.8.3    -O

LIBRARIES:  build as static only
FEATURES:   MT unix WinMain Cygwin CygwinMT
PACKAGES:
  enabled:  UUID Z BZ2 LZO PCRE GNUTLS OPENSSL MySQL BerkeleyDB BerkeleyDB++ 
PYTHON Boost.Spirit Boost.Test.Included OpenGL MESA GLUT ICU EXPAT LIBXML 
LIBXSLT Xerces SQLITE3 HDF5 JPEG PNG TIFF GIF XPM FreeType
  disabled: LocalZ LocalBZ2 LocalPCRE Sybase DBLib FreeTDS ODBC PYTHON23 
PYTHON24 PYTHON25 CPPUNIT Boost.Regex Boost.Test Boost.Threads C-Toolkit FLTK 
wxWindows wxWidgets wx2.8 Fast-CGI LocalSSS LocalNCBILS LocalMSGMAIL2 SSSUTILS 
SSSDB SP ORBacus SABLOT Xalan SQLITE SQLITE3ASYNC OECHEM SGE MUPARSER UNGIF
PROJECTS:
  enabled:  cgi connext ncbi_crypt serial objects dbapi app algo
  disabled: local_lbsm bdb ctools gui gbench

Tools / flags / paths:  
/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/Makefile.mk
Configuration  header:  
/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/inc/ncbiconf_unix.h

To build everything:  cd 
/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build
 && make all_r
or simply run make in the current directory


******* CONFIGURATION SUCCESSFUL *******

--------------------------------
MAKE

make[6]: Leaving directory 
'/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/corelib'
/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/Makefile.meta:191:
 recipe for target 'all.nonusr' failed
make[5]: *** [all.nonusr] Error 2
make[5]: Leaving directory 
'/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/corelib'
/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/Makefile.meta:183:
 recipe for target 'all.real' failed
make[4]: *** [all.real] Error 2
make[4]: Leaving directory 
'/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/corelib'
/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/Makefile.meta:241:
 recipe for target 'all_r.needs-reqs' failed
make[3]: *** [all_r.needs-reqs] Error 2
make[3]: Leaving directory 
'/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build/corelib'
Makefile.meta:290: recipe for target 'all_r.real' failed
make[2]: *** [all_r.real] Error 5
make[2]: Leaving directory 
'/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build'
Makefile.meta:241: recipe for target 'all_r.needs-reqs' failed
make[1]: *** [all_r.needs-reqs] Error 2
make[1]: Leaving directory 
'/cygdrive/c/Users/s4278679/Desktop/JellyfishandCygwin/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC483-ReleaseMT64/build'
Makefile:22: recipe for target 'all' failed
make: *** [all] Error 2


-----------------------------------
Thank you very much.


-----Original Message-----
From: Yann Droneaud [mailto:address@hidden 
Sent: Friday, 13 June 2014 11:28 PM
To: Van Nam Hoang
Cc: address@hidden
Subject: Re: confiig.guess problem

Hi,

Le vendredi 13 juin 2014 à 12:08 +0000, Van Nam Hoang a écrit :
> config.guess timestamp = 2003-02-22
> 

commit 64c794e628df3db19e11f10ae876f71cef815603
Author: Ben Elliston <address@hidden>
Date:   Thu Feb 10 03:37:55 2005 +0000

        * config.guess (amd64:CYGWIN*:*:*): New.
        * testsuite/config-sub.data: Add amd64-cygwin, x86_64-cygwin.
        * testsuite/config-guess.data: Add x86_64-unknown-cygwin test.

So try to grab an updated config.guess script released after 2005-02-10.

>  
> 
> uname -m = x86_64
> 
> uname -r = 1.7.30(0.272/5/3)
> 
> uname -s = CYGWIN_NT-6.1
> 
> uname -v = 2014-05-23 10:36
> 
>  
> 
> /usr/bin/uname -p = unknown
> 
> /bin/uname -X     =
> 
>  
> 
> hostinfo               =
> 
> /bin/universe          =
> 
> /usr/bin/arch -k       =
> 
> /bin/arch              = x86_64
> 
> /usr/bin/oslevel       =
> 
> /usr/convex/getsysinfo =
> 
>  
> 
> UNAME_MACHINE = x86_64
> 
> UNAME_RELEASE = 1.7.30(0.272/5/3)
> 
> UNAME_SYSTEM  = CYGWIN_NT-6.1
> 
> UNAME_VERSION = 2014-05-23 10:36
> 
> configure: error: cannot guess build type; you must specify one

Regards.

-- 
Yann Droneaud
OPTEYA