bug#50887: closed ([PATCH] gnu: Add python-fitsio.)

[GNU bug Tracking System]

Your message dated Mon, 04 Oct 2021 16:10:05 +0200
with message-id <87v92cop8i.fsf_-_@gnu.org>
and subject line Re: bug#50887: [PATCH] gnu: Add python-fitsio.
has caused the debbugs.gnu.org bug report #50887,
regarding [PATCH] gnu: Add python-fitsio.
to be marked as done.

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50887: http://debbugs.gnu.org/cgi/bugreport.cgi?bug=50887
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> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: Add python-fitsio.
>
>
>
>
> Date: 
>
> Wed, 29 Sep 2021 10:47:39 +0200
>
>
>
>
> * gnu/packages/astronomy.scm (python-fitsio): New variable.
> ---
>  gnu/packages/astronomy.scm | 43 ++++++++++++++++++++++++++++++++++++++
>  1 file changed, 43 insertions(+)
>
> diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm
> index a3f7d5cbf4..4fba3aae99 100644
> --- a/gnu/packages/astronomy.scm
> +++ b/gnu/packages/astronomy.scm
> @@ -96,6 +96,49 @@ in FITS files.")
>      (license (license:non-copyleft "file://License.txt"
>                            "See License.txt in the distribution."))))
>  
> +(define-public python-fitsio
> +  (package
> +    (name "python-fitsio")
> +    (version "1.1.5")
> +    (source
> +     (origin
> +       (method url-fetch)
> +       (uri (pypi-uri "fitsio" version))
> +       (sha256
> +        (base32 "1llql2i6xr9lkdl81jx5nvz80kspamvira90546y32ldy551hq1l"))))
> +    (build-system python-build-system)
> +    (arguments
> +     `(#:phases
> +       (modify-phases %standard-phases
> +         (add-after 'unpack 'unbundle-cfitsio
> +           (lambda* (#:key inputs #:allow-other-keys)
> +             (let* ((cfitsio (assoc-ref inputs "cfitsio"))
> +                    (includedir (string-append "\"" cfitsio "/include\""))
> +                    (libdir (string-append "\"" cfitsio "/lib\"")))
> +               ;; Use Guix' cfitsio instead of the bundled one
> +               (substitute* "setup.py"
> +                 (("self.use_system_fitsio = False") "pass")
> +                 (("self.system_fitsio_includedir = None") "pass")
> +                 (("self.system_fitsio_libdir = None") "pass")
> +                 (("self.use_system_fitsio") "True")
> +                 (("self.system_fitsio_includedir") includedir)
> +                 (("self.system_fitsio_libdir") libdir)))
> +             ;; The bzip2 test fails because Guix' cfitsio
> +             ;; is built without bzip2 support.
> +             (substitute* "fitsio/test.py"
> +               (("'SKIP_BZIP_TEST' in os.environ") "True"))
> +             #t)))))
> +    (propagated-inputs
> +     `(("python-numpy" ,python-numpy)
> +       ("cfitsio" ,cfitsio)))
> +    (home-page "https://github.com/esheldon/fitsio";)
> +    (synopsis
> +     "Python library to read from and write to FITS files")
> +    (description
> +     "A compact Python library for reading from and writing to FITS files,
> +based on the CFITSIO library.")
> +    (license license:gpl2)))
> +
>  (define-public qfits
>    (package
>      (name "qfits")
> -- 
> 2.33.0
>
>
>
>
> --- End Message ---
> --- Begin Message ---
>
>
>
> Subject: 
>
> Re: bug#50887: [PATCH] gnu: Add python-fitsio.
>
>
>
>
> Date: 
>
> Mon, 04 Oct 2021 16:10:05 +0200
>
>
>
>
> User-agent: 
>
> Gnus/5.13 (Gnus v5.13) Emacs/27.2 (gnu/linux)
>
>
>
>
> Hi Konrad,
>
> Konrad Hinsen <konrad.hinsen@fastmail.net> skribis:
>
> >>From c95c0b18b4c2da6af7432a3dcf11c5f9984772f8 Mon Sep 17 00:00:00 2001
> > From: Konrad Hinsen <konrad.hinsen@fastmail.net>
> > Date: Wed, 29 Sep 2021 10:47:39 +0200
> > Subject: [PATCH] gnu: Add python-fitsio.
> >
> > * gnu/packages/astronomy.scm (python-fitsio): New variable.
>
> Applied.  Thank you & thanks Xinglu for reviewing!
>
> Ludo’.
>
>
> --- End Message ---