bug#74118: closed ([PATCH] gnu: Add r-raceid.)

[GNU bug Tracking System]

Your message dated Fri, 01 Nov 2024 12:28:40 +0100
with message-id <87bjyzjiqf.fsf@elephly.net>
and subject line [PATCH] gnu: Add r-raceid.
has caused the debbugs.gnu.org bug report #74118,
regarding [PATCH] gnu: Add r-raceid.
to be marked as done.

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-- 
74118: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=74118
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> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: Add r-raceid.
>
>
>
>
> Date: 
>
> Wed, 30 Oct 2024 19:08:31 +0000
>
>
>
>
> * gnu/packages/cran.scm (r-raceid): New variable.
>
> Change-Id: I337463c66040179f5a4a1622fb759a87ebd2344a
> ---
>  gnu/packages/cran.scm | 47 +++++++++++++++++++++++++++++++++++++++++++
>  1 file changed, 47 insertions(+)
>
> diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
> index 6c0861509d..1c2efc6b4c 100644
> --- a/gnu/packages/cran.scm
> +++ b/gnu/packages/cran.scm
> @@ -13107,6 +13107,53 @@ (define-public r-shinyace
>  environment within Shiny.")
>      (license license:expat)))
>  
> +(define-public r-raceid
> +  (package
> +    (name "r-raceid")
> +    (version "0.3.6")
> +    (source
> +     (origin
> +       (method url-fetch)
> +       (uri (cran-uri "RaceID" version))
> +       (sha256
> +        (base32 "0zqas0dfsvcbjzv2b83zy13pxyzfhh81xrfbzxq8a7ykk0nyrx26"))))
> +    (properties `((upstream-name . "RaceID")))
> +    (build-system r-build-system)
> +    (propagated-inputs (list r-cluster
> +                             r-coop
> +                             r-fateid
> +                             r-fnn
> +                             r-fpc
> +                             r-ggplot2
> +                             r-harmony
> +                             r-ica
> +                             r-igraph
> +                             r-irlba
> +                             r-leiden
> +                             r-locfit
> +                             r-mass
> +                             r-matrix
> +                             r-matrixstats
> +                             r-pheatmap
> +                             r-princurve
> +                             r-quadprog
> +                             r-randomforest
> +                             r-rcolorbrewer
> +                             r-rcpp
> +                             r-rtsne
> +                             r-runner
> +                             r-umap
> +                             r-vegan))
> +    (native-inputs (list r-knitr))
> +    (home-page "https://cran.r-project.org/package=RaceID";)
> +    (synopsis
> +     "Algorithm for inferring cell types from single-cell RNA-seq data")
> +    (description
> +     "This tool provides an algorithm to identify rare cell types in 
> single-cell data.
> +It also identifies abundant cell types.  The method is based on transcript
> +counts obtained with unique molecular identifies.")
> +    (license license:gpl3)))
> +
>  (define-public r-rafalib
>    (package
>      (name "r-rafalib")
>
> base-commit: d6f775c30c6f47e174f6110d1089edc6315600e4
> prerequisite-patch-id: 54292fa0b75533f02730e2da44993ad685d4a432
> prerequisite-patch-id: 360575ef7e49c4e4e6b52644964df061856aee57
> prerequisite-patch-id: 3904682af2961b8cb06ced06ab62c60604114dad
> prerequisite-patch-id: 0e861c88ccc360c3a1bcd0ce92d90a9aeb1455c0
> -- 
> 2.43.0
>
>
>
>
> --- End Message ---
> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: Add r-raceid.
>
>
>
>
> Date: 
>
> Fri, 01 Nov 2024 12:28:40 +0100
>
>
>
>
> Applied, thanks!
>
> -- 
> Ricardo
>
>
> --- End Message ---