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Re: [ESPResSo-devel] Mass Dependent Diffusion in Langevin Thermostat
From: |
Ulf Schiller |
Subject: |
Re: [ESPResSo-devel] Mass Dependent Diffusion in Langevin Thermostat |
Date: |
Thu, 18 Jun 2015 13:08:08 +0100 |
User-agent: |
Mozilla/5.0 (X11; Linux x86_64; rv:31.0) Gecko/20100101 Thunderbird/31.7.0 |
I agree and the obvious source is the Langevin noise - one only has to
look at the units to see that it's wrong...
On 18/06/15 10:42, Joost de Graaf wrote:
> Dear All,
>
> Just a quick check before I open a bug report. In my understanding the
> friction coefficient in the Langevin thermostat is supposed to represent
>
> $\zeta = 6 \pi \eta R$
>
> and therefore, the diffusion coefficient in LD should not depend on the
> mass of the particle. However, in ESPResSo, the behavior is different,
> see attached MSD.png. Is this because we choose a different way to
> define the input parameter for the Langevin thermostat? I did not find
> anything on it in the UG, so I think the ESPResSo behavior is wrong --
> but if anyone can come up with a good argument as to why it should be
> this way, I'm listening.
>
> If such fundamental things are broken, we should check the rotational
> diffusion, and other simple aspects of ESPResSo as well.
>
> Kind Regards, Joost
--
Dr Ulf D Schiller
Centre for Computational Science
University College London
20 Gordon Street
London WC1H 0AJ
United Kingdom
Phone: +44 (0)20 7679 5300