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[Espressomd-maintainer] Build failed in Jenkins: master-doc #119


From: Jenkins Demon
Subject: [Espressomd-maintainer] Build failed in Jenkins: master-doc #119
Date: Wed, 23 Apr 2014 16:43:11 +0200 (CEST)

See <http://espressomd.org/jenkins/job/master-doc/119/changes>

Changes:

[Axel Arnold] lb no longer touches resort_particles

------------------------------------------
[...truncated 140 lines...]
checking for doxygen... /usr/bin/doxygen
checking for dot... /usr/bin/dot
checking for pdflatex... /usr/bin/pdflatex
checking for makeindex... /usr/bin/makeindex
checking for bibtex... /usr/bin/bibtex
****************************************************************
*               Checking for standard headers                  *
****************************************************************
checking for ANSI C header files... (cached) yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking float.h usability... yes
checking float.h presence... yes
checking for float.h... yes
checking for inttypes.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for strings.h... (cached) yes
checking sys/file.h usability... yes
checking sys/file.h presence... yes
checking for sys/file.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking for unistd.h... (cached) yes
****************************************************************
*               Checking for standard functions                *
****************************************************************
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for working memcmp... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible realloc... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking for sys/socket.h... (cached) yes
checking types of arguments for select... int,fd_set *,struct timeval *
checking for size_t... yes
checking for working strtod... yes
checking for atexit... yes
checking for floor... yes
checking for getcwd... yes
checking for gethostbyname... yes
checking for memset... yes
checking for pow... yes
checking for rint... yes
checking for select... yes
checking for socket... yes
checking for sqrt... yes
****************************************************************
*         Checking for required tools and libraries            *
****************************************************************
checking whether to use FFTW... yes
checking for library containing fftw_plan_many_dft... -lfftw3
checking fftw3.h usability... yes
checking fftw3.h presence... yes
checking for fftw3.h... yes
checking whether to use CUDA... yes
checking for nvcc... /usr/local/cuda/bin/nvcc
checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no
checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no
checking whether the /usr/local/cuda/bin/nvcc linker 
(/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes
checking how to hardcode library paths into programs... immediate
checking for libcudart... yes
checking for libcufft... yes
checking whether CUDA compiles... yes
checking whether CUDA runs... yes
****************************************************************
*                  Checking for Python                         *
****************************************************************
checking for a Python interpreter with version >= 2.5... python
checking for python... /usr/local/bin/python
checking for python version... 2.7
checking for python platform... linux2
checking for python script directory... ${prefix}/lib/python2.7/site-packages
checking for python extension module directory... 
${exec_prefix}/lib/python2.7/site-packages
checking whether python -B works... yes
checking whether to build the python interface... no
****************************************************************
*                  Checking for Tcl/Tk                         *
****************************************************************
checking whether to build the Tcl interface... yes
checking for libtcl8.6... no
checking for libtcl8.5... yes
checking for tcl.h... yes
checking whether to use Tk... yes
****************************************************************
*                   Other settings                             *
****************************************************************
checking whether to use efence... no
checking whether the variable MYCONFIG is set... no
checking the number of available CPUs... 8 
****************************************************************
*                   Creating output files                      *
****************************************************************
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config/Makefile
config.status: creating config/myconfig-sample-header.hpp
config.status: creating src/Makefile
config.status: creating src/tcl/Makefile
config.status: creating src/python/Makefile
config.status: creating tools/Makefile
config.status: creating scripts/Makefile
config.status: creating testsuite/Makefile
config.status: creating doc/Makefile
config.status: creating doc/logo/Makefile
config.status: creating doc/ug/Makefile
config.status: creating doc/dg/Makefile
config.status: creating doc/doxygen/Makefile
config.status: creating doc/tutorials/Makefile
config.status: creating doc/tutorials/01-lennard_jones/Makefile
config.status: creating doc/tutorials/02-charged_system/Makefile
config.status: creating doc/tutorials/03-object_in_fluid/Makefile
config.status: creating doc/latexit.sh
config.status: creating testsuite/runtest.sh
config.status: creating tools/es_mpiexec
config.status: creating src/acconfig.hpp
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing myconfig-sample.hpp commands
****************************************************************
*                   Configuration summary                      *
****************************************************************
platform detected       = x86_64-unknown-linux-gnu
package version         = 3.2.0-798-gd19bf34
development sources     = yes

Compiler
--------
compiler                = mpic++
linker                  = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64
c++ compiler flags      = -Wall -O5 
c++ preprocessor flags  = 
linker flags            =  -L/usr/local/cuda/lib64
libraries               = -ltcl8.5 -lcufft -lcudart -lfftw3  -lm
using debug flags       = 
using profiling flags   = 

Libraries
---------
FFTW                    = yes
efence                  = no

Cuda
----
CUDA compiler           = /usr/local/cuda/bin/nvcc
CUDA flags              =  --ptxas-options=-v -gencode 
arch=compute_11,code=compute_11 -gencode arch=compute_20,code=compute_20

Tcl/Tk
------
Tcl version             = tcl8.5
Tk version              = none

Python
------
python                  = /usr/local/bin/python -B
build python interface  = no

Other settings
--------------
config                  = myconfig.hpp
installation prefix     = /home/jenkins/Espresso
number of test tasks    = 8
mympiexec               = 
<http://espressomd.org/jenkins/job/master-doc/ws/mympiexec.sh>
mpiexec                 = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec
pdflatex                = /usr/bin/pdflatex
makeindex               = /usr/bin/makeindex
bibtex                  = /usr/bin/bibtex
doxygen                 = /usr/bin/doxygen
dot                     = /usr/bin/dot

Not building Python interface.
END CONFIGURE
<http://espressomd.org/jenkins/job/master-doc/ws/>
+ maintainer/jenkins/doc.sh
31320 (process ID) old priority 0, new priority 5
  srcdir=<http://espressomd.org/jenkins/job/master-doc/ws/>
  builddir=<http://espressomd.org/jenkins/job/master-doc/ws/>
  insource=true
<http://espressomd.org/jenkins/job/master-doc/ws/> 
<http://espressomd.org/jenkins/job/master-doc/ws/>
START DOC
>make doc
cd doc; make --print-directory doc
make[1]: Entering directory 
`<http://espressomd.org/jenkins/job/master-doc/ws/doc'>
cd ug; make --print-directory ug
make[2]: Entering directory 
`<http://espressomd.org/jenkins/job/master-doc/ws/doc/ug'>
Assembling quickref.inp..
Running LaTeX..
sh ../latexit.sh . ug
TEXINPUTS=.:.:<http://espressomd.org/jenkins/job/master-doc/ws/doc>:
ESPRESSO_VERSION=3.2.0-798-gd19bf34
Running LaTeX stage 1...
This is pdfTeX, Version 3.1415926-2.4-1.40.13 (TeX Live 2012/TeX Live for SUSE 
Linux)
 restricted \write18 enabled.
entering extended mode
ERROR: LaTeX stage 1 failed.
These are the last 20 lines of ug.log:
--------------------------------------------
(./run.tex
Chapter 7.

Overfull \hbox (0.99998pt too wide) in paragraph at lines 26--30
 [] [] 
 []

! Undefined control sequence.
l.47 ...exttt{integrate 1} does the same as \textt
                                                  {integrate 100}, 
Here is how much of TeX's memory you used:
 17929 strings out of 493607
 308544 string characters out of 3149946
 414304 words of memory out of 3500000
 20591 multiletter control sequences out of 15000+200000
 20902 words of font info for 76 fonts, out of 3000000 for 9000
 831 hyphenation exceptions out of 8191
 75i,16n,80p,504b,860s stack positions out of 5000i,500n,10000p,200000b,50000s

!  ==> Fatal error occurred, no output PDF file produced!
--------------------------------------------
make[2]: *** [ug.pdf] Error 1
make[2]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-doc/ws/doc/ug'>
make[1]: *** [ug] Error 2
make[1]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-doc/ws/doc'>
make: *** [doc] Error 2
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE
Archiving artifacts



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