[Espressomd-maintainer] Build failed in Jenkins: master-nightly-multiconfig » molcut,nompi #87

[Jenkins Demon]

See 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/87/changes>

Changes:

[Stefan Kesselheim] added missing get_interpolated_velocity function

------------------------------------------
[...truncated 248 lines...]
config.status: creating config/myconfig-sample-header.hpp
config.status: creating src/Makefile
config.status: creating src/tcl/Makefile
config.status: creating src/python/Makefile
config.status: creating src/python/espresso/Makefile
config.status: creating tools/Makefile
config.status: creating scripts/Makefile
config.status: creating testsuite/Makefile
config.status: creating doc/Makefile
config.status: creating doc/logo/Makefile
config.status: creating doc/ug/Makefile
config.status: creating doc/dg/Makefile
config.status: creating doc/doxygen/Makefile
config.status: creating doc/tutorials/Makefile
config.status: creating doc/tutorials/01-lennard_jones/Makefile
config.status: creating doc/tutorials/02-charged_system/Makefile
config.status: creating doc/tutorials/03-object_in_fluid/Makefile
config.status: creating doc/latexit.sh
config.status: creating testsuite/runtest.sh
config.status: creating tools/es_mpiexec
config.status: creating src/python/pypresso
config.status: creating src/acconfig.hpp
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing myconfig-sample.hpp commands
****************************************************************
*                   Configuration summary                      *
****************************************************************
platform detected       = x86_64-unknown-linux-gnu
package version         = 3.2.0-981-g2dafa32
development sources     = yes

Compiler
--------
compiler                = g++
linker                  = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64
c++ compiler flags      = -Wall -O5 
c++ preprocessor flags  = 
linker flags            =  -L/usr/local/cuda/lib64
libraries               = -ltcl8.5 -lcufft -lcudart -lfftw3  -lm
using debug flags       = 
using profiling flags   = 

Libraries
---------
FFTW                    = yes
efence                  = no

Cuda
----
CUDA compiler           = /usr/local/cuda/bin/nvcc
CUDA flags              =  --ptxas-options=-v -gencode 
arch=compute_20,code=compute_20

Tcl/Tk
------
Tcl version             = tcl8.5
Tk version              = none

Python
------
python                  = /usr/local/bin/python -B
build python interface  = no

Other settings
--------------
config                  = myconfig.hpp
installation prefix     = /home/jenkins/Espresso
number of test tasks    = 8
mympiexec               = 
mpiexec                 = 
pdflatex                = /usr/bin/pdflatex
makeindex               = /usr/bin/makeindex
bibtex                  = /usr/bin/bibtex
doxygen                 = /usr/bin/doxygen
dot                     = /usr/bin/dot

WARNING: MPI disabled or not supported! Parallelization turned off.
Not building Python interface.
END CONFIGURE
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/ws/>
+ maintainer/jenkins/build.sh
13166 (process ID) old priority 0, new priority 5
  
srcdir=<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/ws/>
  
builddir=<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/ws/>
  insource=true
  parallelism=nompi
START BUILD
  myconfig=molcut
  build_procs=4
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/ws/>
 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/ws/>
Copying molcut.hpp to 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/ws/myconfig.hpp...>
>make -j 4
Making all in config
make[1]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/ws/config'>
make[1]: Nothing to be done for `all'.
make[1]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/ws/config'>
Making all in src
make[1]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/ws/src'>
  GEN      myconfig-final.hpp <= ../myconfig.hpp
  GEN      config-features.cpp
  GEN      config-features.hpp
make  all-recursive
make[2]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/ws/src'>
Making all in .
make[3]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/ws/src'>
  CXX      cells.lo
  CXX      config-features.lo
  CXX      collision.lo
  CXX      communication.lo
  CXX      comfixed.lo
  CXX      comforce.lo
  CXX      constraint.lo
  CXX      cuda_interface.lo
In file included from forces.hpp:41:0,
                 from communication.cpp:34:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
communication.cpp: In function 'void mpi_external_potential_broadcast(int)':
communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable]
In file included from energy.hpp:33:0,
                 from constraint.cpp:27:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      debug.lo
  CXX      domain_decomposition.lo
In file included from forces.hpp:41:0,
                 from domain_decomposition.cpp:29:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      electrokinetics_pdb_parse.lo
  CXX      energy.lo
In file included from energy.hpp:33:0,
                 from energy.cpp:24:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      external_potential.lo
  CXX      errorhandling.lo
external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)':
external_potential.cpp:176:46: warning: deprecated conversion from string 
constant to 'char*' [-Wwrite-strings]
  CXX      fft.lo
  CXX      fft-common.lo
  CXX      fft-dipolar.lo
  CXX      forcecap.lo
  CXX      forces.lo
  CXX      galilei.lo
In file included from forces.hpp:41:0,
                 from pressure.hpp:32,
                 from forces.cpp:33:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      ghosts.lo
In file included from forces.hpp:41:0,
                 from galilei.cpp:28:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      global.lo
In file included from forces.hpp:41:0,
                 from ghosts.cpp:37:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      grid.lo
  CXX      halo.lo
  CXX      iccp3m.lo
  CXX      imd.lo
In file included from forces.hpp:41:0,
                 from iccp3m.hpp:97,
                 from iccp3m.cpp:33:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      initialize.lo
In file included from energy.hpp:33:0,
                 from initialize.cpp:31:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      integrate.lo
In file included from forces.hpp:41:0,
                 from pressure.hpp:32,
                 from integrate.cpp:45:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      interaction_data.lo
In file included from forces.hpp:41:0,
                 from pressure.hpp:32,
                 from interaction_data.cpp:32:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      lattice.lo
lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, 
double*, double*)':
lattice.cpp:151:33: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:156:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:163:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:170:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:177:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:184:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:191:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:198:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:205:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable]
lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable]
lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable]
lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, 
double*)':
lattice.cpp:253:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:260:33: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable]
  CXX      layered.lo
  CXX      lb.lo
In file included from forces.hpp:41:0,
                 from layered.cpp:33:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
lb.cpp: In function 'void lb_prepare_communication()':
lb.cpp:1755:54: error: 'MPI_Type_get_extent' was not declared in this scope
lb.cpp:1758:75: error: 'MPI_Type_create_hvector' was not declared in this scope
  CXX      lb-boundaries.lo
make[3]: *** [lb.lo] Error 1
make[3]: *** Waiting for unfinished jobs....
make[3]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/ws/src'>
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/ws/src'>
make[1]: *** [all] Error 2
make[1]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=nompi/ws/src'>
make: *** [all-recursive] Error 1
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE