[Espressomd-maintainer] Build failed in Jenkins: master-nightly-debug #76

[Jenkins Demon]

See <http://espressomd.org/jenkins/job/master-nightly-debug/76/changes>

Changes:

[Axel Arnold] particle print no longer checks for runtime errors, which cannot 
occur anyways

[Axel Arnold] Removed the dysfunctional invalidate_system, updated 
checkpointing documentation.

[Axel Arnold] Removed invalidate_system voodoo from tests

------------------------------------------
[...truncated 325 lines...]
dot                     = /usr/bin/dot

Not building Python interface.
END CONFIGURE
<http://espressomd.org/jenkins/job/master-nightly-debug/ws/>
+ maintainer/jenkins/build.sh
17264 (process ID) old priority 0, new priority 5
  srcdir=<http://espressomd.org/jenkins/job/master-nightly-debug/ws/>
  builddir=<http://espressomd.org/jenkins/job/master-nightly-debug/ws/>
  insource=true
START BUILD
  myconfig=nocheck-maxset
  build_procs=4
<http://espressomd.org/jenkins/job/master-nightly-debug/ws/> 
<http://espressomd.org/jenkins/job/master-nightly-debug/ws/>
Copying nocheck-maxset.hpp to 
<http://espressomd.org/jenkins/job/master-nightly-debug/ws/myconfig.hpp...>
>make -j 4
Making all in config
make[1]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-debug/ws/config'>
make[1]: Nothing to be done for `all'.
make[1]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-debug/ws/config'>
Making all in src
make[1]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-debug/ws/src'>
  GEN      myconfig-final.hpp <= ../myconfig.hpp
  GEN      config-features.hpp
  GEN      config-features.cpp
make  all-recursive
make[2]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-debug/ws/src'>
Making all in .
make[3]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-debug/ws/src'>
  CXX      config-features.lo
  CXX      cells.lo
  CXX      collision.lo
  CXX      communication.lo
  CXX      comfixed.lo
  CXX      comforce.lo
  CXX      constraint.lo
  CXX      cuda_interface.lo
  CXX      debug.lo
  CXX      domain_decomposition.lo
  CXX      electrokinetics_pdb_parse.lo
  CXX      energy.lo
  CXX      external_potential.lo
  CXX      errorhandling.lo
  CXX      fft.lo
  CXX      fft-common.lo
external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)':
external_potential.cpp:176:46: warning: deprecated conversion from string 
constant to 'char*' [-Wwrite-strings]
  CXX      fft-dipolar.lo
  CXX      forcecap.lo
  CXX      forces.lo
  CXX      galilei.lo
  CXX      ghosts.lo
  CXX      global.lo
  CXX      grid.lo
  CXX      halo.lo
  CXX      iccp3m.lo
  CXX      imd.lo
  CXX      initialize.lo
  CXX      integrate.lo
  CXX      interaction_data.lo
  CXX      lattice.lo
lattice.cpp: In function 'void _lattice_allocate_memory(Lattice*)':
lattice.cpp:101:79: warning: overflow in implicit constant conversion 
[-Woverflow]
lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, 
double*, double*)':
lattice.cpp:151:33: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:156:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:163:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:170:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:177:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:184:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:191:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:198:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:205:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable]
lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable]
lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable]
lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, 
double*)':
lattice.cpp:253:31: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:260:33: warning: comparison between signed and unsigned integer 
expressions [-Wsign-compare]
lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable]
  CXX      layered.lo
  CXX      lb.lo
  CXX      lb-boundaries.lo
lb.cpp: In function 'void lb_reinit_parameters()':
lb.cpp:1830:3: warning: format '%f' expects argument of type 'double', but 
argument 9 has type 'double*' [-Wformat]
lb.cpp:1830:3: warning: format '%f' expects argument of type 'double', but 
argument 10 has type 'double*' [-Wformat]
  CXX      lbgpu.lo
  CXX      metadynamics.lo
  CXX      modes.lo
  CXX      molforces.lo
  CXX      mol_cut.lo
  CXX      nemd.lo
  CXX      nsquare.lo
  CXX      particle_data.lo
lb.cpp: At global scope:
lb.cpp:152:12: warning: 'failcounter' defined but not used [-Wunused-variable]
  CXX      polymer.lo
  CXX      pressure.lo
  CXX      random.lo
  CXX      rattle.lo
  CXX      reaction.lo
  CXX      rotation.lo
  CXX      specfunc.lo
  CXX      statistics.lo
  CXX      statistics_chain.lo
  CXX      statistics_cluster.lo
  CXX      statistics_correlation.lo
  CXX      statistics_fluid.lo
  CXX      statistics_molecule.lo
  CXX      statistics_observable.lo
  CXX      statistics_wallstuff.lo
  CXX      thermostat.lo
statistics_observable.cpp: In function 'int 
observable_calc_radial_density_profile(observable*)':
statistics_observable.cpp:631:25: warning: comparison between signed and 
unsigned integer expressions [-Wsign-compare]
statistics_observable.cpp: In function 'int 
observable_calc_radial_flux_density_profile(observable*)':
statistics_observable.cpp:683:25: warning: comparison between signed and 
unsigned integer expressions [-Wsign-compare]
statistics_observable.cpp: In function 'int 
observable_calc_flux_density_profile(observable*)':
statistics_observable.cpp:765:25: warning: comparison between signed and 
unsigned integer expressions [-Wsign-compare]
statistics_observable.cpp: In function 'int 
observable_calc_particle_positions(observable*)':
statistics_observable.cpp:801:16: warning: unused variable 'i' 
[-Wunused-variable]
statistics_observable.cpp: In function 'int 
observable_calc_particle_forces(observable*)':
statistics_observable.cpp:821:16: warning: unused variable 'i' 
[-Wunused-variable]
statistics_observable.cpp: In function 'int 
observable_reset_average(observable*)':
statistics_observable.cpp:885:9: warning: unused variable 'error' 
[-Wunused-variable]
statistics_observable.cpp: In function 'int observable_calculate(observable*)':
statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in 
this function [-Wmaybe-uninitialized]
statistics_observable.cpp: In function 'int observable_update(observable*)':
statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in 
this function [-Wmaybe-uninitialized]
  CXX      topology.lo
  CXX      tuning.lo
  CXX      uwerr.lo
  CXX      verlet.lo
  CXX      virtual_sites.lo
  CXX      virtual_sites_com.lo
  CXX      virtual_sites_relative.lo
  CXX      vmdsock.lo
  CXX      ghmc.lo
  CXX      EspressoSystemInterface.lo
  CXX      bmhtf-nacl.lo
  CXX      buckingham.lo
  CXX      dpd.lo
  CXX      gaussian.lo
  CXX      gb.lo
  CXX      hat.lo
  CXX      hertzian.lo
  CXX      lj.lo
  CXX      ljangle.lo
  CXX      ljcos.lo
  CXX      ljcos2.lo
  CXX      ljgen.lo
  CXX      morse.lo
  CXX      soft_sphere.lo
  CXX      steppot.lo
  CXX      tab.lo
  CXX      tunable_slip.lo
  CXX      angle.lo
  CXX      angle_harmonic.lo
  CXX      angle_cosine.lo
  CXX      angle_cossquare.lo
  CXX      angledist.lo
  CXX      dihedral.lo
  CXX      endangledist.lo
endangledist.cpp: In function 'int calc_endangledist_pair_force(Particle*, 
Particle*, Bonded_ia_parameters*, double*, double*, double*)':
endangledist.cpp:239:3: warning: too many arguments for format 
[-Wformat-extra-args]
  CXX      fene.lo
endangledist.cpp:239:3: warning: 'fac_b' may be used uninitialized in this 
function [-Wmaybe-uninitialized]
endangledist.cpp:239:3: warning: 'fac_a' may be used uninitialized in this 
function [-Wmaybe-uninitialized]
endangledist.cpp:239:3: warning: 'dist' may be used uninitialized in this 
function [-Wmaybe-uninitialized]
  CXX      harmonic.lo
  CXX      overlap.lo
  CXX      subt_lj.lo
  CXX      debye_hueckel.lo
  CXX      elc.lo
  CXX      magnetic_non_p3m_methods.lo
  CXX      mdlc_correction.lo
  CXX      maggs.lo
  CXX      mmm1d.lo
  CXX      mmm2d.lo
  CXX      mmm-common.lo
  CXX      p3m.lo
  CXX      p3m-common.lo
  CXX      p3m-dipolar.lo
  CXX      reaction_field.lo
  NVCC     cuda_init_cuda.lo
  NVCC     cuda_common_cuda.lo
  NVCC     electrokinetics_cuda.lo
  NVCC     lbgpu_cuda.lo
lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced

  NVCC     p3m_gpu_cuda.lo
  NVCC     EspressoSystemInterface_cuda.lo
lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced

  NVCC     HarmonicForce.lo
  GEN      config-version.cpp
  CXX      object-in-fluid/area_force_local.lo
  CXX      object-in-fluid/area_force_global.lo
  CXX      object-in-fluid/bending_force.lo
  CXX      object-in-fluid/stretching_force.lo
  CXX      object-in-fluid/stretchlin_force.lo
  CXX      object-in-fluid/volume_force.lo
  CXX      config-version.lo
  CXXLD    libEspresso.la
make[3]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-debug/ws/src'>
Making all in tcl
make[3]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-debug/ws/src/tcl'>
  CXX      binary_file_tcl.lo
  CXX      bin_tcl.lo
  CXX      blockfile_tcl.lo
  CXX      cells_tcl.lo
  CXX      channels_tcl.lo
  CXX      collision_tcl.lo
  CXX      comfixed_tcl.lo
  CXX      comforce_tcl.lo
  CXX      config_tcl.lo
  CXX      constraint_tcl.lo
  CXX      domain_decomposition_tcl.lo
  CXX      electrokinetics_tcl.lo
  CXX      external_potential_tcl.lo
  CXX      energy_tcl.lo
external_potential_tcl.cpp: In function 'int 
tclcommand_external_potential_tabulated(Tcl_Interp*, int, char**, 
ExternalPotential*)':
external_potential_tcl.cpp:31:7: warning: unused variable 'type' 
[-Wunused-variable]
external_potential_tcl.cpp:32:10: warning: unused variable 'scale' 
[-Wunused-variable]
  CXX      galilei_tcl.lo
  CXX      global_tcl.lo
  CXX      grid_tcl.lo
  CXX      iccp3m_tcl.lo
  CXX      imd_tcl.lo
  CXX      initialize_interpreter.lo
initialize_interpreter.cpp:28:25: fatal error: cells_tcl.hpp: No such file or 
directory
compilation terminated.
make[3]: *** [initialize_interpreter.lo] Error 1
make[3]: *** Waiting for unfinished jobs....
iccp3m_tcl.cpp: In function 'int tclcommand_iccp3m_parse_normals(Tcl_Interp*, 
int, char*)':
iccp3m_tcl.cpp:191:9: warning: unused variable 'token' [-Wunused-variable]
iccp3m_tcl.cpp:192:7: warning: unused variable 'scan_succes' [-Wunused-variable]
iccp3m_tcl.cpp:196:14: warning: unused variable 'opening_bracket' 
[-Wunused-variable]
iccp3m_tcl.cpp:197:14: warning: unused variable 'closing_bracket' 
[-Wunused-variable]
iccp3m_tcl.cpp:198:14: warning: unused variable 'space' [-Wunused-variable]
iccp3m_tcl.cpp:200:14: warning: unused variable 'delimiters' [-Wunused-variable]
make[3]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-debug/ws/src/tcl'>
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-debug/ws/src'>
make[1]: *** [all] Error 2
make[1]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-debug/ws/src'>
make: *** [all-recursive] Error 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE
Archiving artifacts