[Espressomd-maintainer] Build failed in Jenkins: master-nightly-multiconfig » rest2,3core #124

[Jenkins Demon]

See 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/124/changes>

Changes:

[Olaf Lenz] Put inlined functions from forces.hpp to forces_inline.hpp.

[Olaf Lenz] Created generic coulomb cloud wall testcase.

------------------------------------------
[...truncated 195 lines...]
checking for gethostbyname... yes
checking for memset... yes
checking for pow... yes
checking for rint... yes
checking for select... yes
checking for socket... yes
checking for sqrt... yes
****************************************************************
*         Checking for required tools and libraries            *
****************************************************************
checking whether to use FFTW... yes
checking for library containing fftw_plan_many_dft... -lfftw3
checking fftw3.h usability... yes
checking fftw3.h presence... yes
checking for fftw3.h... yes
checking whether to use CUDA... yes
checking for nvcc... /usr/local/cuda/bin/nvcc
checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no
checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no
checking whether the /usr/local/cuda/bin/nvcc linker 
(/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes
checking how to hardcode library paths into programs... immediate
checking for libcudart... yes
checking for libcufft... yes
checking whether CUDA compiles... yes
checking whether CUDA runs... yes
****************************************************************
*                  Checking for Python                         *
****************************************************************
checking for a Python interpreter with version >= 2.5... python
checking for python... /usr/local/bin/python
checking for python version... 2.7
checking for python platform... linux2
checking for python script directory... ${prefix}/lib/python2.7/site-packages
checking for python extension module directory... 
${exec_prefix}/lib/python2.7/site-packages
checking whether python -B works... yes
checking whether the python interface is wanted... no
****************************************************************
*                  Checking for Tcl/Tk                         *
****************************************************************
checking whether to build the Tcl interface... yes
checking for libtcl8.6... yes
checking for tcl.h... yes
checking whether to use Tk... yes
****************************************************************
*                   Other settings                             *
****************************************************************
checking whether to use efence... no
checking whether the variable MYCONFIG is set... no
checking the number of available CPUs... 8 
****************************************************************
*                   Creating output files                      *
****************************************************************
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config/Makefile
config.status: creating config/myconfig-sample-header.hpp
config.status: creating src/Makefile
config.status: creating src/core/Makefile
config.status: creating src/tcl/Makefile
config.status: creating src/python/espressomd/Makefile
config.status: creating tools/Makefile
config.status: creating scripts/Makefile
config.status: creating testsuite/Makefile
config.status: creating doc/Makefile
config.status: creating doc/logo/Makefile
config.status: creating doc/ug/Makefile
config.status: creating doc/dg/Makefile
config.status: creating doc/doxygen/Makefile
config.status: creating doc/tutorials/Makefile
config.status: creating doc/tutorials/01-lennard_jones/Makefile
config.status: creating doc/tutorials/02-charged_system/Makefile
config.status: creating doc/tutorials/03-object_in_fluid/Makefile
config.status: creating doc/latexit.sh
config.status: creating testsuite/runtest.sh
config.status: creating tools/es_mpiexec
config.status: creating src/python/pypresso
config.status: creating src/acconfig.hpp
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing myconfig-sample.hpp commands
****************************************************************
*                   Configuration summary                      *
****************************************************************
platform detected       = x86_64-suse-linux-gnu
package version         = 3.2.0-1161-g107a391
development sources     = yes

Compiler
--------
compiler                = mpic++
linker                  = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64
c++ compiler flags      = -Wall -O5 
c++ preprocessor flags  = 
linker flags            =  -L/usr/local/cuda/lib64
libraries               = -ltcl8.6 -lcufft -lcudart -lfftw3  -lm
using debug flags       = 
using profiling flags   = 

Libraries
---------
FFTW                    = yes
efence                  = no

Cuda
----
CUDA compiler           = /usr/local/cuda/bin/nvcc
CUDA flags              =  --ptxas-options=-v -gencode 
arch=compute_20,code=compute_20

Tcl/Tk
------
Tcl version             = tcl8.6
Tk version              = none

Python
------
python                  = /usr/local/bin/python -B
build python interface  = 

Other settings
--------------
config                  = myconfig.hpp
installation prefix     = /home/jenkins/Espresso
number of test tasks    = 8
mympiexec               = 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/mympiexec.sh>
mpiexec                 = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec
pdflatex                = /usr/bin/pdflatex
makeindex               = /usr/bin/makeindex
bibtex                  = /usr/bin/bibtex
doxygen                 = /usr/bin/doxygen
dot                     = /usr/bin/dot

Not building Python interface.
END CONFIGURE
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/>
+ maintainer/jenkins/build.sh
958 (process ID) old priority 0, new priority 5
  
srcdir=<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/>
  
builddir=<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/>
  insource=true
  parallelism=3core
START BUILD
  myconfig=rest2
  build_procs=4
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/>
 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/>
Copying rest2.hpp to 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/myconfig.hpp...>
>make -j 4
Making all in config
make[1]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/config'>
make[1]: Nothing to be done for `all'.
make[1]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/config'>
Making all in src
make[1]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/src'>
make  all-recursive
make[2]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/src'>
Making all in core
make[3]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/src/core'>
  GEN      config-features.hpp
  GEN      myconfig-final.hpp <= ../../myconfig.hpp
  GEN      config-features.cpp
make  all-am
make[4]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/src/core'>
  CXX      config-features.lo
  CXX      cells.lo
  CXX      collision.lo
  CXX      communication.lo
  CXX      comfixed.lo
  CXX      comforce.lo
  CXX      constraint.lo
  CXX      cuda_interface.lo
  CXX      debug.lo
  CXX      domain_decomposition.lo
  CXX      electrokinetics_pdb_parse.lo
  CXX      energy.lo
  CXX      external_potential.lo
  CXX      errorhandling.lo
  CXX      fft.lo
  CXX      fft-common.lo
  CXX      fft-dipolar.lo
  CXX      forcecap.lo
  CXX      forces.lo
  CXX      galilei.lo
  CXX      ghosts.lo
  CXX      global.lo
  CXX      grid.lo
  CXX      halo.lo
  CXX      iccp3m.lo
  CXX      imd.lo
  CXX      initialize.lo
  CXX      integrate.lo
  CXX      interaction_data.lo
  CXX      lattice.lo
  CXX      layered.lo
  CXX      lb.lo
  CXX      lb-boundaries.lo
  CXX      lbgpu.lo
  CXX      metadynamics.lo
  CXX      modes.lo
  CXX      molforces.lo
  CXX      mol_cut.lo
  CXX      nemd.lo
  CXX      nsquare.lo
  CXX      particle_data.lo
  CXX      polymer.lo
  CXX      pressure.lo
  CXX      random.lo
  CXX      rattle.lo
  CXX      reaction.lo
  CXX      rotation.lo
  CXX      specfunc.lo
  CXX      statistics.lo
  CXX      statistics_chain.lo
  CXX      statistics_cluster.lo
  CXX      statistics_correlation.lo
  CXX      statistics_fluid.lo
  CXX      statistics_molecule.lo
  CXX      statistics_observable.lo
  CXX      statistics_wallstuff.lo
  CXX      thermostat.lo
  CXX      topology.lo
  CXX      tuning.lo
  CXX      uwerr.lo
  CXX      verlet.lo
  CXX      virtual_sites.lo
  CXX      virtual_sites_com.lo
virtual_sites_com.cpp: In function 'void calc_mol_pos(Particle*, double*)':
virtual_sites_com.cpp:144:45: error: 'get_mi_vector' was not declared in this 
scope
virtual_sites_com.cpp: In function 'double get_mol_dist(Particle*, Particle*)':
virtual_sites_com.cpp:308:47: error: 'get_mi_vector' was not declared in this 
scope
  CXX      virtual_sites_relative.lo
virtual_sites_com.cpp: In function 'void calc_force_between_mol(int, int, 
double*)':
virtual_sites_com.cpp:362:43: error: 'get_mi_vector' was not declared in this 
scope
virtual_sites_com.cpp: In function 'double calc_energy_kinetic_mol(int)':
virtual_sites_com.cpp:392:15: error: 'time_step' was not declared in this scope
virtual_sites_com.cpp: In function 'void 
get_mol_dist_vector_from_molid_cfg(int, int, double*)':
virtual_sites_com.cpp:495:47: error: 'get_mi_vector' was not declared in this 
scope
make[4]: *** [virtual_sites_com.lo] Error 1
make[4]: *** Waiting for unfinished jobs....
make[4]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/src/core'>
make[3]: *** [all] Error 2
make[3]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/src/core'>
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/src'>
make[1]: *** [all] Error 2
make[1]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=rest2,parallelism=3core/ws/src'>
make: *** [all-recursive] Error 1
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE