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[Espressomd-maintainer] Build failed in Jenkins: master-nightly-multicon

From: Jenkins Demon
Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-multiconfig » molcut,4core #124
Date: Tue, 5 Aug 2014 04:16:42 +0200 (CEST) 
See 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/124/changes>

Changes:

[Olaf Lenz] Put inlined functions from forces.hpp to forces_inline.hpp.

[Olaf Lenz] Created generic coulomb cloud wall testcase.

------------------------------------------
[...truncated 306 lines...]
Tcl version             = tcl8.6
Tk version              = none

Python
------
python                  = /usr/local/bin/python -B
build python interface  = 

Other settings
--------------
config                  = myconfig.hpp
installation prefix     = /home/jenkins/Espresso
number of test tasks    = 8
mympiexec               = 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/mympiexec.sh>
mpiexec                 = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec
pdflatex                = /usr/bin/pdflatex
makeindex               = /usr/bin/makeindex
bibtex                  = /usr/bin/bibtex
doxygen                 = /usr/bin/doxygen
dot                     = /usr/bin/dot

Not building Python interface.
END CONFIGURE
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/>
+ maintainer/jenkins/build.sh
1683 (process ID) old priority 0, new priority 5
  
srcdir=<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/>
  
builddir=<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/>
  insource=true
  parallelism=4core
START BUILD
  myconfig=molcut
  build_procs=4
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/>
 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/>
Copying molcut.hpp to 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/myconfig.hpp...>
>make -j 4
Making all in config
make[1]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/config'>
make[1]: Nothing to be done for `all'.
make[1]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/config'>
Making all in src
make[1]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/src'>
make  all-recursive
make[2]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/src'>
Making all in core
make[3]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/src/core'>
  GEN      myconfig-final.hpp <= ../../myconfig.hpp
  GEN      config-features.hpp
  GEN      config-features.cpp
make  all-am
make[4]: Entering directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/src/core'>
  CXX      cells.lo
  CXX      config-features.lo
  CXX      collision.lo
  CXX      communication.lo
  CXX      comfixed.lo
  CXX      comforce.lo
  CXX      constraint.lo
  CXX      cuda_interface.lo
In file included from energy.hpp:33:0,
                 from communication.cpp:38:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
In file included from energy.hpp:33:0,
                 from constraint.cpp:27:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
In file included from energy.hpp:33:0,
                 from cuda_interface.cpp:28:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      debug.lo
  CXX      domain_decomposition.lo
In file included from forces_inline.hpp:38:0,
                 from pressure.hpp:32,
                 from domain_decomposition.cpp:30:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      electrokinetics_pdb_parse.lo
  CXX      energy.lo
  CXX      external_potential.lo
In file included from energy.hpp:33:0,
                 from energy.cpp:24:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      errorhandling.lo
  CXX      fft.lo
  CXX      fft-common.lo
  CXX      fft-dipolar.lo
  CXX      forcecap.lo
  CXX      forces.lo
  CXX      galilei.lo
  CXX      ghosts.lo
  CXX      global.lo
In file included from forces_inline.hpp:38:0,
                 from ghosts.cpp:39:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
In file included from forces_inline.hpp:38:0,
                 from forces.cpp:27:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      grid.lo
  CXX      halo.lo
  CXX      iccp3m.lo
  CXX      imd.lo
  CXX      initialize.lo
  CXX      integrate.lo
In file included from energy.hpp:33:0,
                 from initialize.cpp:31:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
In file included from forces_inline.hpp:38:0,
                 from pressure.hpp:32,
                 from integrate.cpp:45:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      interaction_data.lo
  CXX      lattice.lo
  CXX      layered.lo
In file included from forces_inline.hpp:38:0,
                 from pressure.hpp:32,
                 from interaction_data.cpp:32:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      lb.lo
In file included from forces_inline.hpp:38:0,
                 from pressure.hpp:32,
                 from layered.cpp:34:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      lb-boundaries.lo
  CXX      lbgpu.lo
  CXX      metadynamics.lo
  CXX      modes.lo
  CXX      molforces.lo
  CXX      mol_cut.lo
  CXX      nemd.lo
  CXX      nsquare.lo
  CXX      particle_data.lo
In file included from forces_inline.hpp:38:0,
                 from pressure.hpp:32,
                 from nsquare.cpp:33:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      polymer.lo
  CXX      pressure.lo
  CXX      random.lo
In file included from forces_inline.hpp:38:0,
                 from pressure.hpp:32,
                 from pressure.cpp:24:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      rattle.lo
  CXX      reaction.lo
  CXX      rotation.lo
  CXX      specfunc.lo
  CXX      statistics.lo
  CXX      statistics_chain.lo
In file included from energy.hpp:33:0,
                 from statistics.cpp:34:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      statistics_cluster.lo
  CXX      statistics_correlation.lo
  CXX      statistics_fluid.lo
  CXX      statistics_molecule.lo
  CXX      statistics_observable.lo
  CXX      statistics_wallstuff.lo
  CXX      thermostat.lo
In file included from forces_inline.hpp:38:0,
                 from pressure.hpp:32,
                 from statistics_observable.cpp:23:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
  CXX      topology.lo
  CXX      tuning.lo
  CXX      uwerr.lo
  CXX      verlet.lo
  CXX      virtual_sites.lo
  CXX      virtual_sites_com.lo
In file included from energy.hpp:33:0,
                 from verlet.cpp:36:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
In file included from forces_inline.hpp:38:0,
                 from pressure.hpp:32,
                 from virtual_sites.cpp:23:
p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, 
double*, double, double, double*)':
p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used 
[-Wunused-but-set-variable]
p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used 
[-Wunused-but-set-variable]
virtual_sites_com.cpp: In function 'void calc_mol_pos(Particle*, double*)':
virtual_sites_com.cpp:144:45: error: 'get_mi_vector' was not declared in this 
scope
virtual_sites_com.cpp: In function 'double get_mol_dist(Particle*, Particle*)':
virtual_sites_com.cpp:308:47: error: 'get_mi_vector' was not declared in this 
scope
virtual_sites_com.cpp: In function 'void calc_force_between_mol(int, int, 
double*)':
virtual_sites_com.cpp:362:43: error: 'get_mi_vector' was not declared in this 
scope
virtual_sites_com.cpp: In function 'double calc_energy_kinetic_mol(int)':
virtual_sites_com.cpp:392:15: error: 'time_step' was not declared in this scope
virtual_sites_com.cpp: In function 'void calc_dipole_of_molecule(int, double*)':
virtual_sites_com.cpp:444:50: error: 'get_mi_vector' was not declared in this 
scope
virtual_sites_com.cpp: In function 'void 
get_mol_dist_vector_from_molid_cfg(int, int, double*)':
virtual_sites_com.cpp:495:47: error: 'get_mi_vector' was not declared in this 
scope
make[4]: *** [virtual_sites_com.lo] Error 1
make[4]: *** Waiting for unfinished jobs....
make[4]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/src/core'>
make[3]: *** [all] Error 2
make[3]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/src/core'>
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/src'>
make[1]: *** [all] Error 2
make[1]: Leaving directory 
`<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=molcut,parallelism=4core/ws/src'>
make: *** [all-recursive] Error 1
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE
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