[Espressomd-maintainer] Build failed in Jenkins: master-build-check #266

[Jenkins Demon]

See <http://espressomd.org/jenkins/job/master-build-check/266/changes>

Changes:

[hr_zaheri] fixing some warnings

------------------------------------------
[...truncated 609 lines...]
  CXX      metadynamics_tcl.lo
  CXX      nemd_tcl.lo
  CXX      mol_cut_tcl.lo
  CXX      parser.lo
  CXX      particle_data_tcl.lo
  CXX      polymer_tcl.lo
  CXX      pressure_tcl.lo
  CXX      random_tcl.lo
  CXX      reaction_tcl.lo
  CXX      rattle_tcl.lo
  CXX      statistics_chain_tcl.lo
  CXX      statistics_cluster_tcl.lo
  CXX      statistics_correlation_tcl.lo
  CXX      statistics_fluid_tcl.lo
  CXX      statistics_observable_tcl.lo
  CXX      statistics_wallstuff_tcl.lo
  CXX      statistics_tcl.lo
  CXX      thermostat_tcl.lo
  CXX      topology_tcl.lo
  CXX      tuning_tcl.lo
  CXX      uwerr_tcl.lo
  CXX      virtual_sites_com_tcl.lo
  CXX      ghmc_tcl.lo
  CXX      bmhtf-nacl_tcl.lo
  CXX      buckingham_tcl.lo
  CXX      dpd_tcl.lo
  CXX      forcecap_tcl.lo
  CXX      gaussian_tcl.lo
  CXX      gb_tcl.lo
  CXX      hat_tcl.lo
  CXX      hertzian_tcl.lo
  CXX      lj_tcl.lo
  CXX      ljangle_tcl.lo
  CXX      ljcos2_tcl.lo
  CXX      ljcos_tcl.lo
  CXX      ljgen_tcl.lo
  CXX      morse_tcl.lo
  CXX      soft_sphere_tcl.lo
  CXX      steppot_tcl.lo
  CXX      tab_tcl.lo
  CXX      tunable_slip_tcl.lo
  CXX      angle_tcl.lo
  CXX      angle_harmonic_tcl.lo
  CXX      angle_cosine_tcl.lo
  CXX      angle_cossquare_tcl.lo
  CXX      angledist_tcl.lo
  CXX      dihedral_tcl.lo
  CXX      endangledist_tcl.lo
  CXX      fene_tcl.lo
  CXX      harmonic_tcl.lo
  CXX      overlap_tcl.lo
  CXX      subt_lj_tcl.lo
  CXX      object-in-fluid/area_force_local_tcl.lo
  CXX      object-in-fluid/area_force_global_tcl.lo
  CXX      object-in-fluid/bending_force_tcl.lo
  CXX      object-in-fluid/stretching_force_tcl.lo
  CXX      object-in-fluid/stretchlin_force_tcl.lo
  CXX      object-in-fluid/volume_force_tcl.lo
  CXX      debye_hueckel_tcl.lo
  CXX      elc_tcl.lo
  CXX      magnetic_non_p3m_methods_tcl.lo
  CXX      maggs_tcl.lo
  CXX      mmm1d_tcl.lo
  CXX      mmm2d_tcl.lo
  CXX      p3m-dipolar_tcl.lo
  CXX      p3m_tcl.lo
  CXX      reaction_field_tcl.lo
  CXX      mdlc_correction_tcl.lo
  CXX      actor/Mmm1dgpu_tcl.lo
  CXX      actor/HarmonicWell_tcl.lo
  CXX      cuda_init_tcl.lo
  CXXLD    libEspressoTcl.la
  CXX      Espresso_install-scriptsdir.o
  CXX      Espresso_install-main.o
  NVCC     cuda_workaround.o
  CXXLD    Espresso.install
  CXX      Espresso-scriptsdir.o
  CXX      Espresso-main.o
  CXXLD    Espresso
make[3]: Leaving directory 
`/scratch/jenkins/workspace/master-build-check/src/tcl'
make[3]: Entering directory `/scratch/jenkins/workspace/master-build-check/src'
make[3]: Leaving directory `/scratch/jenkins/workspace/master-build-check/src'
make[2]: Leaving directory `/scratch/jenkins/workspace/master-build-check/src'
make[1]: Leaving directory `/scratch/jenkins/workspace/master-build-check/src'
Making all in .
make[1]: Entering directory `/scratch/jenkins/workspace/master-build-check'
cd .; sh config/genversion.sh -rd > 
/scratch/jenkins/workspace/master-build-check/version.txt
test -L Espresso || ln -s src/tcl/Espresso .
make[1]: Leaving directory `/scratch/jenkins/workspace/master-build-check'
Making all in scripts
make[1]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/scripts'
for file in init.tcl ABHmath.tcl auxiliary.tcl blockfile_support.tcl bundle.tcl 
countBonds.tcl dielectrics.tcl gibbs_ghmc.tcl object_in_fluid.tcl 
parallel_tempering.tcl pdb.tcl polymer.tcl statistics.tcl vtf.tcl vtk.tcl; do \
  if test ! -e $file || test ! $file -ef 
/scratch/jenkins/workspace/master-build-check/scripts/$file; then \
    /usr/bin/install -c -m 644 
/scratch/jenkins/workspace/master-build-check/scripts/$file 
/scratch/jenkins/workspace/master-build-check/scripts; \
  fi; \
done
make[1]: Leaving directory 
`/scratch/jenkins/workspace/master-build-check/scripts'
Making all in tools
make[1]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/tools'
make[1]: Nothing to be done for `all'.
make[1]: Leaving directory `/scratch/jenkins/workspace/master-build-check/tools'
Making all in testsuite
make[1]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/testsuite'
make[1]: Nothing to be done for `all'.
make[1]: Leaving directory 
`/scratch/jenkins/workspace/master-build-check/testsuite'
Making all in doc
make[1]: Entering directory `/scratch/jenkins/workspace/master-build-check/doc'
Making all in logo
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`/scratch/jenkins/workspace/master-build-check/doc/logo'
make[2]: Nothing to be done for `all'.
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`/scratch/jenkins/workspace/master-build-check/doc/logo'
Making all in doxygen
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`/scratch/jenkins/workspace/master-build-check/doc/doxygen'
make[2]: Nothing to be done for `all'.
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`/scratch/jenkins/workspace/master-build-check/doc/doxygen'
Making all in dg
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`/scratch/jenkins/workspace/master-build-check/doc/dg'
make[2]: Nothing to be done for `all'.
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`/scratch/jenkins/workspace/master-build-check/doc/dg'
Making all in ug
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make[2]: Nothing to be done for `all'.
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Making all in tutorials
make[2]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/doc/tutorials'
Making all in 01-lennard_jones
make[3]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/doc/tutorials/01-lennard_jones'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory 
`/scratch/jenkins/workspace/master-build-check/doc/tutorials/01-lennard_jones'
Making all in 02-charged_system
make[3]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/doc/tutorials/02-charged_system'
make[3]: Nothing to be done for `all'.
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`/scratch/jenkins/workspace/master-build-check/doc/tutorials/02-charged_system'
Making all in 03-object_in_fluid
make[3]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/doc/tutorials/03-object_in_fluid'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory 
`/scratch/jenkins/workspace/master-build-check/doc/tutorials/03-object_in_fluid'
make[3]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/doc/tutorials'
make[3]: Nothing to be done for `all-am'.
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`/scratch/jenkins/workspace/master-build-check/doc/tutorials'
make[2]: Leaving directory 
`/scratch/jenkins/workspace/master-build-check/doc/tutorials'
make[2]: Entering directory `/scratch/jenkins/workspace/master-build-check/doc'
make[2]: Nothing to be done for `all-am'.
make[2]: Leaving directory `/scratch/jenkins/workspace/master-build-check/doc'
make[1]: Leaving directory `/scratch/jenkins/workspace/master-build-check/doc'
/scratch/jenkins/workspace/master-build-check
END BUILD
+ maintainer/jenkins/check.sh
  srcdir=/scratch/jenkins/workspace/master-build-check
  builddir=/scratch/jenkins/workspace/master-build-check
  insource=true
START TEST
  with_mpi=true
  with_cuda=true
  check_procs=4
/scratch/jenkins/workspace/master-build-check 
/scratch/jenkins/workspace/master-build-check
>make check processors="4"
Making check in config
make[1]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/config'
make[1]: Nothing to be done for `check'.
make[1]: Leaving directory 
`/scratch/jenkins/workspace/master-build-check/config'
Making check in src
make[1]: Entering directory `/scratch/jenkins/workspace/master-build-check/src'
Making check in core
make[2]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/src/core'
  GEN      myconfig-final.hpp <= ../../myconfig.hpp
make  check-am
make[3]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/src/core'
  GEN      myconfig-final.hpp <= ../../myconfig.hpp
  GEN      config-version.cpp
make[3]: Leaving directory 
`/scratch/jenkins/workspace/master-build-check/src/core'
make[2]: Leaving directory 
`/scratch/jenkins/workspace/master-build-check/src/core'
Making check in tcl
make[2]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/src/tcl'
make[2]: Nothing to be done for `check'.
make[2]: Leaving directory 
`/scratch/jenkins/workspace/master-build-check/src/tcl'
make[2]: Entering directory `/scratch/jenkins/workspace/master-build-check/src'
make[2]: Leaving directory `/scratch/jenkins/workspace/master-build-check/src'
make[1]: Leaving directory `/scratch/jenkins/workspace/master-build-check/src'
Making check in .
make[1]: Entering directory `/scratch/jenkins/workspace/master-build-check'
cd .; sh config/genversion.sh -rd > 
/scratch/jenkins/workspace/master-build-check/version.txt
test -L Espresso || ln -s src/tcl/Espresso .
make[1]: Leaving directory `/scratch/jenkins/workspace/master-build-check'
Making check in scripts
make[1]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/scripts'
for file in init.tcl ABHmath.tcl auxiliary.tcl blockfile_support.tcl bundle.tcl 
countBonds.tcl dielectrics.tcl gibbs_ghmc.tcl object_in_fluid.tcl 
parallel_tempering.tcl pdb.tcl polymer.tcl statistics.tcl vtf.tcl vtk.tcl; do \
  if test ! -e $file || test ! $file -ef 
/scratch/jenkins/workspace/master-build-check/scripts/$file; then \
    /usr/bin/install -c -m 644 
/scratch/jenkins/workspace/master-build-check/scripts/$file 
/scratch/jenkins/workspace/master-build-check/scripts; \
  fi; \
done
make  check-local
make[2]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/scripts'
for file in init.tcl ABHmath.tcl auxiliary.tcl blockfile_support.tcl bundle.tcl 
countBonds.tcl dielectrics.tcl gibbs_ghmc.tcl object_in_fluid.tcl 
parallel_tempering.tcl pdb.tcl polymer.tcl statistics.tcl vtf.tcl vtk.tcl; do \
  if test ! -e $file || test ! $file -ef 
/scratch/jenkins/workspace/master-build-check/scripts/$file; then \
    /usr/bin/install -c -m 644 
/scratch/jenkins/workspace/master-build-check/scripts/$file 
/scratch/jenkins/workspace/master-build-check/scripts; \
  fi; \
done
make[2]: Leaving directory 
`/scratch/jenkins/workspace/master-build-check/scripts'
make[1]: Leaving directory 
`/scratch/jenkins/workspace/master-build-check/scripts'
Making check in tools
make[1]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/tools'
make[1]: Nothing to be done for `check'.
make[1]: Leaving directory `/scratch/jenkins/workspace/master-build-check/tools'
Making check in testsuite
make[1]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/testsuite'
make  check-local
make[2]: Entering directory 
`/scratch/jenkins/workspace/master-build-check/testsuite'
if test -n "4"; then \
  ./runtest.sh -p "4" analysis.tcl angle.tcl collision-detection-centers.tcl 
collision-detection-poc.tcl comforce.tcl comfixed.tcl command_syntax.tcl 
constraints.tcl constraints_reflecting.tcl correlation.tcl 
constraints_rhomboid.tcl coulomb_cloud_wall.tcl dh.tcl dielectric.tcl 
ek_eof_one_species_x.tcl ek_eof_one_species_y.tcl ek_eof_one_species_z.tcl 
ek_reaction.tcl el2d.tcl el2d_nonneutral.tcl exclusions.tcl 
external_potential.tcl fene.tcl gb.tcl ghmc.tcl harm.tcl iccp3m.tcl intpbc.tcl 
intppbc.tcl kinetic.tcl langevin.tcl layered.tcl lb.tcl lb_fluid_coupling.tcl 
lb_fluid_coupling_gpu.tcl lb_gpu.tcl lb_planar.tcl lb_planar_gpu.tcl 
lb_planar_embedded_particles.tcl lb_planar_embedded_particles_gpu.tcl 
lb_stokes_sphere.tcl lb_stokes_sphere_gpu.tcl lj.tcl lj-cos.tcl lj-generic.tcl 
madelung.tcl maggs.tcl magnetic-field.tcl mass.tcl mass-and-rinertia.tcl 
mdlc.tcl mmm1d.tcl mmm1dgpu.tcl npt.tcl nsquare.tcl nve_pe.tcl 
object_in_fluid.tcl object_in_fluid_gpu.tcl observable.tcl p3m.tcl p3m_gpu.tcl 
p3m_magnetostatics.tcl p3m_magnetostatics2.tcl p3m_simple_noncubic.tcl 
rotation.tcl rotation_per_particle.tcl sc_fluid_gpu.tcl tabulated.tcl 
tunable_slip.tcl uwerr.tcl virtual-sites.tcl; \
else \
  ./runtest.sh analysis.tcl angle.tcl collision-detection-centers.tcl 
collision-detection-poc.tcl comforce.tcl comfixed.tcl command_syntax.tcl 
constraints.tcl constraints_reflecting.tcl correlation.tcl 
constraints_rhomboid.tcl coulomb_cloud_wall.tcl dh.tcl dielectric.tcl 
ek_eof_one_species_x.tcl ek_eof_one_species_y.tcl ek_eof_one_species_z.tcl 
ek_reaction.tcl el2d.tcl el2d_nonneutral.tcl exclusions.tcl 
external_potential.tcl fene.tcl gb.tcl ghmc.tcl harm.tcl iccp3m.tcl intpbc.tcl 
intppbc.tcl kinetic.tcl langevin.tcl layered.tcl lb.tcl lb_fluid_coupling.tcl 
lb_fluid_coupling_gpu.tcl lb_gpu.tcl lb_planar.tcl lb_planar_gpu.tcl 
lb_planar_embedded_particles.tcl lb_planar_embedded_particles_gpu.tcl 
lb_stokes_sphere.tcl lb_stokes_sphere_gpu.tcl lj.tcl lj-cos.tcl lj-generic.tcl 
madelung.tcl maggs.tcl magnetic-field.tcl mass.tcl mass-and-rinertia.tcl 
mdlc.tcl mmm1d.tcl mmm1dgpu.tcl npt.tcl nsquare.tcl nve_pe.tcl 
object_in_fluid.tcl object_in_fluid_gpu.tcl observable.tcl p3m.tcl p3m_gpu.tcl 
p3m_magnetostatics.tcl p3m_magnetostatics2.tcl p3m_simple_noncubic.tcl 
rotation.tcl rotation_per_particle.tcl sc_fluid_gpu.tcl tabulated.tcl 
tunable_slip.tcl uwerr.tcl virtual-sites.tcl; \
fi
** RUNNING TESTSUITE FOR 4 tasks
                       analysis.tcl - FATAL: 
hudson.remoting.RequestAbortedException: java.io.IOException: Unexpected 
termination of the channel
hudson.remoting.RequestAbortedException: 
hudson.remoting.RequestAbortedException: java.io.IOException: Unexpected 
termination of the channel
        at 
hudson.remoting.RequestAbortedException.wrapForRethrow(RequestAbortedException.java:41)
        at 
hudson.remoting.RequestAbortedException.wrapForRethrow(RequestAbortedException.java:34)
        at hudson.remoting.Request.call(Request.java:174)
        at hudson.remoting.Channel.call(Channel.java:739)
        at 
hudson.remoting.RemoteInvocationHandler.invoke(RemoteInvocationHandler.java:168)
        at com.sun.proxy.$Proxy62.join(Unknown Source)
        at hudson.Launcher$RemoteLauncher$ProcImpl.join(Launcher.java:956)
        at hudson.tasks.CommandInterpreter.join(CommandInterpreter.java:137)
        at hudson.tasks.CommandInterpreter.perform(CommandInterpreter.java:97)
        at hudson.tasks.CommandInterpreter.perform(CommandInterpreter.java:66)
        at hudson.tasks.BuildStepMonitor$1.perform(BuildStepMonitor.java:20)
        at 
hudson.model.AbstractBuild$AbstractBuildExecution.perform(AbstractBuild.java:756)
        at hudson.model.Build$BuildExecution.build(Build.java:198)
        at hudson.model.Build$BuildExecution.doRun(Build.java:159)
        at 
hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:529)
        at hudson.model.Run.execute(Run.java:1706)
        at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:43)
        at hudson.model.ResourceController.execute(ResourceController.java:88)
        at hudson.model.Executor.run(Executor.java:232)
Caused by: hudson.remoting.RequestAbortedException: java.io.IOException: 
Unexpected termination of the channel
        at hudson.remoting.Request.abort(Request.java:299)
        at hudson.remoting.Channel.terminate(Channel.java:802)
        at 
hudson.remoting.SynchronousCommandTransport$ReaderThread.run(SynchronousCommandTransport.java:69)
Caused by: java.io.IOException: Unexpected termination of the channel
        at 
hudson.remoting.SynchronousCommandTransport$ReaderThread.run(SynchronousCommandTransport.java:50)
Caused by: java.io.EOFException
        at 
java.io.ObjectInputStream$PeekInputStream.readFully(ObjectInputStream.java:2323)
        at 
java.io.ObjectInputStream$BlockDataInputStream.readShort(ObjectInputStream.java:2792)
        at 
java.io.ObjectInputStream.readStreamHeader(ObjectInputStream.java:800)
        at java.io.ObjectInputStream.<init>(ObjectInputStream.java:298)
        at 
hudson.remoting.ObjectInputStreamEx.<init>(ObjectInputStreamEx.java:40)
        at 
hudson.remoting.AbstractSynchronousByteArrayCommandTransport.read(AbstractSynchronousByteArrayCommandTransport.java:34)
        at 
hudson.remoting.SynchronousCommandTransport$ReaderThread.run(SynchronousCommandTransport.java:48)