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[Espressomd-maintainer] Build failed in Jenkins: master-python-interface
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From: |
Jenkins Demon |
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Subject: |
[Espressomd-maintainer] Build failed in Jenkins: master-python-interface #197 |
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Date: |
Fri, 29 Aug 2014 14:16:14 +0200 (CEST) |
See <http://espressomd.org/jenkins/job/master-python-interface/197/changes>
Changes:
[Olaf Lenz] Fixed analyze.
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[...truncated 384 lines...]
make[1]: Leaving directory
`<http://espressomd.org/jenkins/job/master-python-interface/ws/config'>
Making all in src
make[1]: Entering directory
`<http://espressomd.org/jenkins/job/master-python-interface/ws/src'>
make all-recursive
make[2]: Entering directory
`<http://espressomd.org/jenkins/job/master-python-interface/ws/src'>
Making all in core
make[3]: Entering directory
`<http://espressomd.org/jenkins/job/master-python-interface/ws/src/core'>
GEN myconfig-final.hpp <= ./myconfig-default.hpp
GEN config-features.hpp
make all-am
make[4]: Entering directory
`<http://espressomd.org/jenkins/job/master-python-interface/ws/src/core'>
CXX config-features.lo
CXX cells.lo
CXX collision.lo
CXX communication.lo
CXX comfixed.lo
CXX comforce.lo
CXX constraint.lo
CXX cuda_interface.lo
CXX debug.lo
CXX domain_decomposition.lo
CXX electrokinetics_pdb_parse.lo
CXX energy.lo
energy.cpp: In function 'void calc_long_range_energies()':
energy.cpp:170:11: warning: unused variable 'errtxt' [-Wunused-variable]
CXX external_potential.lo
external_potential.cpp: In function 'int write_local_lattice_to_file(const
char*, Lattice*)':
external_potential.cpp:227:62: warning: format '%d' expects argument of type
'int', but argument 3 has type 'size_t {aka long unsigned int}' [-Wformat]
CXX errorhandling.lo
CXX fft.lo
CXX fft-common.lo
CXX fft-dipolar.lo
CXX forcecap.lo
CXX forces.lo
forces.cpp: In function 'void calc_long_range_forces()':
forces.cpp:154:11: warning: unused variable 'errtxt' [-Wunused-variable]
CXX galilei.lo
CXX ghosts.lo
ghosts.cpp: In function 'void prepare_send_buffer(GhostCommunication*, int)':
ghosts.cpp:220:53: warning: format '%d' expects argument of type 'int', but
argument 5 has type 'long int' [-Wformat]
ghosts.cpp: In function 'void put_recv_buffer(GhostCommunication*, int)':
ghosts.cpp:349:55: warning: format '%d' expects argument of type 'int', but
argument 5 has type 'long int' [-Wformat]
ghosts.cpp:354:59: warning: format '%d' expects argument of type 'int', but
argument 4 has type '__gnu_cxx::__normal_iterator<int*, std::vector<int>
>::difference_type {aka long int}' [-Wformat]
ghosts.cpp: In function 'void add_forces_from_recv_buffer(GhostCommunication*)':
ghosts.cpp:380:55: warning: format '%d' expects argument of type 'int', but
argument 5 has type 'long int' [-Wformat]
CXX global.lo
CXX grid.lo
CXX halo.lo
CXX iccp3m.lo
CXX imd.lo
CXX initialize.lo
CXX integrate.lo
CXX interaction_data.lo
CXX lattice.lo
CXX layered.lo
CXX lb.lo
CXX lb-boundaries.lo
CXX lbgpu.lo
CXX metadynamics.lo
CXX modes.lo
CXX molforces.lo
CXX mol_cut.lo
CXX nemd.lo
CXX nsquare.lo
CXX particle_data.lo
CXX polymer.lo
polymer.cpp: In function 'int constraint_collision(double*, double*)':
polymer.cpp:146:11: warning: enumeration value 'CONSTRAINT_NONE' not handled in
switch [-Wswitch]
polymer.cpp:146:11: warning: enumeration value 'CONSTRAINT_ROD' not handled in
switch [-Wswitch]
polymer.cpp:146:11: warning: enumeration value 'CONSTRAINT_EXT_MAGN_FIELD' not
handled in switch [-Wswitch]
polymer.cpp:146:11: warning: enumeration value 'CONSTRAINT_PLANE' not handled
in switch [-Wswitch]
polymer.cpp:146:11: warning: enumeration value 'CONSTRAINT_STOMATOCYTE' not
handled in switch [-Wswitch]
polymer.cpp:146:11: warning: enumeration value 'CONSTRAINT_SLITPORE' not
handled in switch [-Wswitch]
polymer.cpp:146:11: warning: enumeration value 'CONSTRAINT_HOLLOW_CONE' not
handled in switch [-Wswitch]
CXX pressure.lo
CXX random.lo
CXX rattle.lo
CXX reaction.lo
CXX rotation.lo
CXX specfunc.lo
CXX statistics.lo
CXX statistics_chain.lo
CXX statistics_cluster.lo
CXX statistics_correlation.lo
CXX statistics_fluid.lo
CXX statistics_molecule.lo
CXX statistics_observable.lo
CXX statistics_wallstuff.lo
CXX thermostat.lo
CXX topology.lo
CXX tuning.lo
CXX uwerr.lo
CXX verlet.lo
CXX virtual_sites.lo
CXX virtual_sites_com.lo
CXX virtual_sites_relative.lo
CXX vmdsock.lo
CXX ghmc.lo
CXX EspressoSystemInterface.lo
CXX bmhtf-nacl.lo
CXX buckingham.lo
CXX dpd.lo
CXX gaussian.lo
CXX gb.lo
CXX hat.lo
CXX hertzian.lo
CXX lj.lo
CXX ljangle.lo
CXX ljcos.lo
CXX ljcos2.lo
CXX ljgen.lo
CXX morse.lo
CXX soft_sphere.lo
CXX steppot.lo
CXX tab.lo
CXX tunable_slip.lo
CXX angle.lo
CXX angle_harmonic.lo
CXX angle_cosine.lo
CXX angle_cossquare.lo
CXX angledist.lo
CXX dihedral.lo
CXX endangledist.lo
CXX fene.lo
CXX harmonic.lo
CXX quartic.lo
CXX overlap.lo
CXX bonded_coulomb.lo
CXX subt_lj.lo
CXX object-in-fluid/area_force_local.lo
CXX object-in-fluid/area_force_global.lo
CXX object-in-fluid/bending_force.lo
CXX object-in-fluid/stretching_force.lo
CXX object-in-fluid/stretchlin_force.lo
CXX object-in-fluid/volume_force.lo
CXX debye_hueckel.lo
CXX elc.lo
CXX magnetic_non_p3m_methods.lo
CXX mdlc_correction.lo
CXX maggs.lo
CXX mmm1d.lo
CXX mmm2d.lo
CXX mmm-common.lo
CXX p3m.lo
CXX p3m-common.lo
CXX p3m-dipolar.lo
CXX reaction_field.lo
CXX actor/ActorList.lo
CXX actor/HarmonicWell.lo
CXX actor/Mmm1dgpuForce.lo
GEN config-version.cpp
CXX config-version.lo
NVCC cuda_init_cuda.lo
NVCC cuda_common_cuda.lo
NVCC electrokinetics_cuda.lo
NVCC lbgpu_cuda.lo
NVCC p3m_gpu_cuda.lo
NVCC EspressoSystemInterface_cuda.lo
NVCC actor/Mmm1dgpuForce_cuda.lo
NVCC actor/HarmonicWell_cuda.lo
CXXLD libEspresso.la
make[4]: Leaving directory
`<http://espressomd.org/jenkins/job/master-python-interface/ws/src/core'>
make[3]: Leaving directory
`<http://espressomd.org/jenkins/job/master-python-interface/ws/src/core'>
Making all in python/espressomd
make[3]: Entering directory
`<http://espressomd.org/jenkins/job/master-python-interface/ws/src/python/espressomd'>
GEN gen_pxiconfig.cpp
Reading definitions from ../../../src/features.def...
Done.
Writing gen_pxiconfig.cpp...
Done.
CXXLD gen_pxiconfig
GEN myconfig.pxi
make all-am
make[4]: Entering directory
`<http://espressomd.org/jenkins/job/master-python-interface/ws/src/python/espressomd'>
CXX dummy.o
CXXLD dummy
GEN python-all
CYTHON _init.cpp
CXX _init.lo
CXXLD _init.la
GEN _init.so
CYTHON _system.cpp
CXX _system.lo
CXXLD _system.la
GEN _system.so
CYTHON particle_data.cpp
warning: particle_data.pyx:164:47: local variable 'x' referenced before
assignment
warning: particle_data.pyx:165:16: local variable 'x' referenced before
assignment
warning: particle_data.pyx:264:43: local variable 'x' referenced before
assignment
warning: particle_data.pyx:265:16: local variable 'x' referenced before
assignment
CXX particle_data.lo
In file included from
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0,
from
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17,
from
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from particle_data.cpp:352:
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2:
warning: #warning "Using deprecated NumPy API, disable it by " "#defining
NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
In file included from
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:26:0,
from
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from particle_data.cpp:352:
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1:
warning: 'int _import_array()' defined but not used [-Wunused-function]
In file included from
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ufuncobject.h:327:0,
from particle_data.cpp:353:
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:241:1:
warning: 'int _import_umath()' defined but not used [-Wunused-function]
CXXLD particle_data.la
GEN particle_data.so
CYTHON analyze.cpp
CXX analyze.lo
In file included from
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0,
from
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17,
from
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from analyze.cpp:352:
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2:
warning: #warning "Using deprecated NumPy API, disable it by " "#defining
NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
In file included from
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:26:0,
from
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from analyze.cpp:352:
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1:
warning: 'int _import_array()' defined but not used [-Wunused-function]
In file included from
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/ufuncobject.h:327:0,
from analyze.cpp:353:
/usr/lib64/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:241:1:
warning: 'int _import_umath()' defined but not used [-Wunused-function]
CXXLD analyze.la
GEN analyze.so
CYTHON cellsystem.cpp
Error compiling Cython file:
------------------------------------------------------------
...
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.
#
cimport cellsystem
cimport global_variables
^
------------------------------------------------------------
cellsystem.pyx:20:8: 'global_variables.pxd' not found
make[4]: *** [cellsystem.cpp] Error 1
make[4]: Leaving directory
`<http://espressomd.org/jenkins/job/master-python-interface/ws/src/python/espressomd'>
make[3]: *** [all] Error 2
make[3]: Leaving directory
`<http://espressomd.org/jenkins/job/master-python-interface/ws/src/python/espressomd'>
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory
`<http://espressomd.org/jenkins/job/master-python-interface/ws/src'>
make[1]: *** [all] Error 2
make[1]: Leaving directory
`<http://espressomd.org/jenkins/job/master-python-interface/ws/src'>
make: *** [all-recursive] Error 1
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE
Archiving artifacts