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[Espressomd-maintainer] Build failed in Jenkins: master-build-check #492
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From: |
Jenkins Demon |
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Subject: |
[Espressomd-maintainer] Build failed in Jenkins: master-build-check #492 |
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Date: |
Tue, 9 Jun 2015 20:11:19 +0200 (CEST) |
See <http://espressomd.org/jenkins/job/master-build-check/492/>
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[...truncated 545 lines...]
NVCC electrokinetics_cuda.lo
NVCC fd-electrostatics_cuda.lo
NVCC lbgpu_cuda.lo
NVCC p3m_gpu_cuda.lo
NVCC EspressoSystemInterface_cuda.lo
NVCC integrate_sd_cuda.lo
NVCC integrate_sd_cuda_kernel.lo
NVCC integrate_sd_cuda_debug.lo
NVCC integrate_sd_matrix.lo
NVCC integrate_sd_cuda_device.lo
NVCC actor/Mmm1dgpuForce_cuda.lo
NVCC actor/EwaldgpuForce_cuda.lo
NVCC actor/HarmonicWell_cuda.lo
NVCC actor/HarmonicOrientationWell_cuda.lo
NVCC immersed_boundary/ibm_cuda.lo
CXXLD libEspresso.la
make[4]: Leaving directory
`<http://espressomd.org/jenkins/job/master-build-check/ws/src/core'>
make[3]: Leaving directory
`<http://espressomd.org/jenkins/job/master-build-check/ws/src/core'>
Making all in tcl
make[3]: Entering directory
`<http://espressomd.org/jenkins/job/master-build-check/ws/src/tcl'>
CXX bin_tcl.lo
CXX binary_file_tcl.lo
CXX blockfile_tcl.lo
CXX h5mdfile_tcl.lo
CXX readpdb_tcl.lo
CXX cells_tcl.lo
CXX channels_tcl.lo
CXX collision_tcl.lo
CXX comfixed_tcl.lo
CXX comforce_tcl.lo
CXX config_tcl.lo
CXX constraint_tcl.lo
CXX domain_decomposition_tcl.lo
CXX electrokinetics_tcl.lo
CXX external_potential_tcl.lo
CXX energy_tcl.lo
CXX galilei_tcl.lo
CXX global_tcl.lo
CXX grid_tcl.lo
CXX iccp3m_tcl.lo
CXX imd_tcl.lo
CXX initialize_interpreter.lo
CXX integrate_tcl.lo
CXX interaction_data_tcl.lo
CXX lb-boundaries_tcl.lo
CXX lb_tcl.lo
CXX lees_edwards_tcl.lo
CXX metadynamics_tcl.lo
CXX nemd_tcl.lo
CXX mol_cut_tcl.lo
CXX parser.lo
CXX particle_data_tcl.lo
CXX polymer_tcl.lo
CXX pressure_tcl.lo
CXX random_tcl.lo
CXX reaction_tcl.lo
CXX rattle_tcl.lo
CXX statistics_chain_tcl.lo
CXX statistics_cluster_tcl.lo
CXX statistics_correlation_tcl.lo
CXX statistics_fluid_tcl.lo
CXX statistics_observable_tcl.lo
CXX statistics_wallstuff_tcl.lo
CXX statistics_tcl.lo
CXX thermostat_tcl.lo
CXX topology_tcl.lo
CXX tuning_tcl.lo
CXX uwerr_tcl.lo
CXX virtual_sites_com_tcl.lo
CXX ghmc_tcl.lo
CXX twist_stack_tcl.lo
CXX hydrogen_bond_tcl.lo
CXX minimize_energy_tcl.lo
CXX integrate_sd_tcl.lo
CXX bmhtf-nacl_tcl.lo
CXX buckingham_tcl.lo
CXX cos2_tcl.lo
CXX dpd_tcl.lo
CXX forcecap_tcl.lo
CXX gaussian_tcl.lo
CXX gb_tcl.lo
CXX hat_tcl.lo
CXX hertzian_tcl.lo
CXX lj_tcl.lo
CXX ljangle_tcl.lo
CXX ljcos2_tcl.lo
CXX ljcos_tcl.lo
CXX ljgen_tcl.lo
CXX morse_tcl.lo
CXX soft_sphere_tcl.lo
CXX steppot_tcl.lo
CXX tab_tcl.lo
CXX tunable_slip_tcl.lo
CXX angle_tcl.lo
CXX angle_harmonic_tcl.lo
CXX angle_cosine_tcl.lo
CXX angle_cossquare_tcl.lo
CXX angledist_tcl.lo
CXX dihedral_tcl.lo
CXX endangledist_tcl.lo
CXX fene_tcl.lo
CXX harmonic_dumbbell_tcl.lo
CXX harmonic_tcl.lo
CXX quartic_tcl.lo
CXX bonded_coulomb_tcl.lo
CXX overlap_tcl.lo
CXX subt_lj_tcl.lo
CXX umbrella_tcl.lo
CXX object-in-fluid/area_force_local_tcl.lo
CXX object-in-fluid/area_force_global_tcl.lo
CXX object-in-fluid/bending_force_tcl.lo
CXX object-in-fluid/stretching_force_tcl.lo
CXX object-in-fluid/stretchlin_force_tcl.lo
CXX object-in-fluid/volume_force_tcl.lo
CXX immersed_boundary/ibm_triel_tcl.lo
CXX immersed_boundary/ibm_volume_conservation_tcl.lo
CXX immersed_boundary/ibm_tribend_tcl.lo
CXX debye_hueckel_tcl.lo
CXX elc_tcl.lo
CXX magnetic_non_p3m_methods_tcl.lo
CXX maggs_tcl.lo
CXX mmm1d_tcl.lo
CXX mmm2d_tcl.lo
CXX p3m-dipolar_tcl.lo
CXX p3m_tcl.lo
CXX reaction_field_tcl.lo
CXX mdlc_correction_tcl.lo
CXX actor/Mmm1dgpu_tcl.lo
CXX actor/Ewaldgpu_tcl.lo
CXX actor/HarmonicWell_tcl.lo
CXX actor/HarmonicOrientationWell_tcl.lo
CXX cuda_init_tcl.lo
CXXLD libEspressoTcl.la
CXX Espresso_install-scriptsdir.o
CXX Espresso_install-main.o
NVCC cuda_workaround.o
CXXLD Espresso.install
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function `H5mdfile::H5_Dclose(int,
char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x68): undefined reference to `H5Dclose'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function
`H5mdfile::H5_Dcreate2(int, char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0xa3): undefined reference to `H5Dcreate2'
h5mdfile_tcl.cpp:(.text+0xad): undefined reference to `H5Dget_space'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function
`H5mdfile::H5_Dextend(int, char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x158): undefined reference to `H5Dextend'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function `H5mdfile::H5_Dopen2(int,
char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x17d): undefined reference to `H5Dopen2'
h5mdfile_tcl.cpp:(.text+0x187): undefined reference to `H5Dget_space'
h5mdfile_tcl.cpp:(.text+0x192): undefined reference to `H5Dget_type'
h5mdfile_tcl.cpp:(.text+0x1a3): undefined reference to `H5Tget_size'
h5mdfile_tcl.cpp:(.text+0x1b6): undefined reference to
`H5Sget_simple_extent_dims'
h5mdfile_tcl.cpp:(.text+0x1c9): undefined reference to
`H5Sget_simple_extent_dims'
h5mdfile_tcl.cpp:(.text+0x1d4): undefined reference to `H5Dget_create_plist'
h5mdfile_tcl.cpp:(.text+0x1de): undefined reference to `H5Pget_layout'
h5mdfile_tcl.cpp:(.text+0x223): undefined reference to `H5Pget_chunk'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function `H5mdfile::H5_Dread(int,
char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x24d): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0x254): undefined reference to `H5T_NATIVE_FLOAT_g'
h5mdfile_tcl.cpp:(.text+0x25e): undefined reference to `H5Tequal'
h5mdfile_tcl.cpp:(.text+0x267): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0x26e): undefined reference to `H5T_NATIVE_DOUBLE_g'
h5mdfile_tcl.cpp:(.text+0x278): undefined reference to `H5Tequal'
h5mdfile_tcl.cpp:(.text+0x2c9): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0x2d0): undefined reference to `H5T_NATIVE_INT_g'
h5mdfile_tcl.cpp:(.text+0x2da): undefined reference to `H5Tequal'
h5mdfile_tcl.cpp:(.text+0x32f): undefined reference to `H5Dread'
h5mdfile_tcl.cpp:(.text+0x349): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0x350): undefined reference to `H5T_C_S1_g'
h5mdfile_tcl.cpp:(.text+0x35a): undefined reference to `H5Tequal'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function `H5mdfile::H5_Dwrite(int,
char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x488): undefined reference to `H5Dwrite'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function `H5mdfile::H5_Fclose(int,
char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x4a7): undefined reference to `H5Fclose'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function
`H5mdfile::H5_Fcreate(int, char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x4dc): undefined reference to `H5check_version'
h5mdfile_tcl.cpp:(.text+0x4ee): undefined reference to `H5Fcreate'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function `H5mdfile::H5_Fopen(int,
char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x51c): undefined reference to `H5check_version'
h5mdfile_tcl.cpp:(.text+0x52c): undefined reference to `H5Fopen'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function `H5mdfile::H5_Gclose(int,
char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x548): undefined reference to `H5Gclose'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function
`H5mdfile::H5_Gcreate2(int, char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x572): undefined reference to `H5Gcreate2'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function `H5mdfile::H5_Gopen2(int,
char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x58d): undefined reference to `H5Gopen2'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function `H5mdfile::H5_Pclose(int,
char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x5a8): undefined reference to `H5Pclose'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function
`H5mdfile::H5_Pset_chunk(int, char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x60c): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0x613): undefined reference to
`H5P_CLS_DATASET_CREATE_ID_g'
h5mdfile_tcl.cpp:(.text+0x61a): undefined reference to `H5Pcreate'
h5mdfile_tcl.cpp:(.text+0x62b): undefined reference to `H5Pset_chunk'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function
`H5mdfile::H5_read_value(int, char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x6b1): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0x6b8): undefined reference to `H5T_NATIVE_FLOAT_g'
h5mdfile_tcl.cpp:(.text+0x6c2): undefined reference to `H5Tequal'
h5mdfile_tcl.cpp:(.text+0x6d1): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0x6d8): undefined reference to `H5T_NATIVE_DOUBLE_g'
h5mdfile_tcl.cpp:(.text+0x6e2): undefined reference to `H5Tequal'
h5mdfile_tcl.cpp:(.text+0x6eb): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0x6f2): undefined reference to `H5T_NATIVE_INT_g'
h5mdfile_tcl.cpp:(.text+0x6fc): undefined reference to `H5Tequal'
h5mdfile_tcl.cpp:(.text+0x70b): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0x712): undefined reference to `H5T_C_S1_g'
h5mdfile_tcl.cpp:(.text+0x71c): undefined reference to `H5Tequal'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function `H5mdfile::H5_Sclose(int,
char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x9e8): undefined reference to `H5Sclose'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function
`H5mdfile::H5_Screate_simple(int, char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0xad0): undefined reference to `H5Screate_simple'
h5mdfile_tcl.cpp:(.text+0xbe1): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0xbe8): undefined reference to `H5T_NATIVE_FLOAT_g'
h5mdfile_tcl.cpp:(.text+0xc31): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0xc38): undefined reference to `H5T_NATIVE_INT_g'
h5mdfile_tcl.cpp:(.text+0xc41): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0xc48): undefined reference to `H5T_C_S1_g'
h5mdfile_tcl.cpp:(.text+0xc4f): undefined reference to `H5Tcopy'
h5mdfile_tcl.cpp:(.text+0xc89): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0xc90): undefined reference to `H5T_NATIVE_DOUBLE_g'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function
`H5mdfile::H5_Sselect_hyperslab(int, char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0xdcf): undefined reference to `H5Dget_space'
h5mdfile_tcl.cpp:(.text+0xde8): undefined reference to `H5Sselect_hyperslab'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function
`H5mdfile::H5_write_value(int, char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0xe6c): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0xe73): undefined reference to `H5T_NATIVE_FLOAT_g'
h5mdfile_tcl.cpp:(.text+0xe7d): undefined reference to `H5Tequal'
h5mdfile_tcl.cpp:(.text+0xe8a): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0xe91): undefined reference to `H5T_NATIVE_DOUBLE_g'
h5mdfile_tcl.cpp:(.text+0xe9b): undefined reference to `H5Tequal'
h5mdfile_tcl.cpp:(.text+0xea8): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0xeaf): undefined reference to `H5T_NATIVE_INT_g'
h5mdfile_tcl.cpp:(.text+0xeb9): undefined reference to `H5Tequal'
h5mdfile_tcl.cpp:(.text+0xec2): undefined reference to `H5open'
h5mdfile_tcl.cpp:(.text+0xec9): undefined reference to `H5T_C_S1_g'
h5mdfile_tcl.cpp:(.text+0xed3): undefined reference to `H5Tequal'
./.libs/libEspressoTcl.a(h5mdfile_tcl.o): In function
`H5mdfile::get_dataset_dims(int, char**, Tcl_Interp*)':
h5mdfile_tcl.cpp:(.text+0x1166): undefined reference to `H5Dget_space'
h5mdfile_tcl.cpp:(.text+0x1170): undefined reference to
`H5Sget_simple_extent_ndims'
h5mdfile_tcl.cpp:(.text+0x1194): undefined reference to
`H5Sget_simple_extent_dims'
collect2: error: ld returned 1 exit status
make[3]: *** [Espresso.install] Error 1
make[3]: Leaving directory
`<http://espressomd.org/jenkins/job/master-build-check/ws/src/tcl'>
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory
`<http://espressomd.org/jenkins/job/master-build-check/ws/src'>
make[1]: *** [all] Error 2
make[1]: Leaving directory
`<http://espressomd.org/jenkins/job/master-build-check/ws/src'>
make: *** [all-recursive] Error 1
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE
Archiving artifacts