[Espressomd-maintainer] Build failed in Jenkins: master-nightly-multiconfig » immersed_boundaries,3core #345

[Jenkins Demon]

See 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/345/changes>

Changes:

[Florian Weik] Fix regressions.

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[...truncated 205 lines...]
checking for pow... yes
checking for rint... yes
checking for select... yes
checking for socket... yes
checking for sqrt... yes
****************************************************************
*         Checking for required tools and libraries            *
****************************************************************
checking whether to use FFTW... yes
checking for libfftw3... yes
checking for fftw3.h... yes
checking whether to use CUDA... yes
checking for nvcc... /usr/local/cuda/bin/nvcc
checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no
checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no
checking whether the /usr/local/cuda/bin/nvcc linker 
(/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes
checking how to hardcode library paths into programs... immediate
checking for libcudart... yes
checking for libcufft... yes
checking for libcublas... yes
checking for cublas_v2.h... yes
checking for libcurand... yes
checking whether CUDA compiles... yes
checking whether CUDA runs... yes
checking for boostlib >= 1.48... yes
checking whether the Boost::Unit_Test_Framework library is available... yes
checking whether to use MAGMA... guess
checking for library containing magma_init... no
configure: WARNING: MAGMA not found. Some features will not be available!
checking whether to use ARPACK... guess
checking for libarpack... no
configure: WARNING: could not find ARPACK library. Some features will not be 
available!
configure: WARNING: ARPACK not found. Some features will not be available!
****************************************************************
*                  Checking for Python                         *
****************************************************************
checking for a Python interpreter with version >= 2.5... python
checking for python... /usr/bin/python
checking for python version... 2.7
checking for python platform... linux2
checking for python script directory... ${prefix}/lib/python2.7/site-packages
checking for python extension module directory... 
${exec_prefix}/lib64/python2.7/site-packages
checking whether python -B works... yes
checking whether the python interface is wanted... no
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*                  Checking for Tcl/Tk                         *
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checking whether to build the Tcl interface... yes
checking for libtcl8.6... yes
checking for tcl.h... yes
checking whether to use Tk... yes
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*                          h5md                                *
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checking whether to build with h5md support... yes
checking for libhdf5... yes
checking for hdf5.h... yes
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*                   Other settings                             *
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checking whether to use efence... no
checking whether the variable MYCONFIG is set... no
checking the number of available CPUs... 8 
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*                   Creating output files                      *
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checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config/Makefile
config.status: creating config/myconfig-sample-header.hpp
config.status: creating src/Makefile
config.status: creating src/core/Makefile
config.status: creating src/tcl/Makefile
config.status: creating src/python/espressomd/Makefile
config.status: creating src/core/unit_tests/Makefile
config.status: creating tools/Makefile
config.status: creating scripts/Makefile
config.status: creating testsuite/Makefile
config.status: creating doc/Makefile
config.status: creating doc/logo/Makefile
config.status: creating doc/ug/Makefile
config.status: creating doc/dg/Makefile
config.status: creating doc/doxygen/Makefile
config.status: creating doc/tutorials/Makefile
config.status: creating doc/tutorials/00-building_espresso/Makefile
config.status: creating doc/tutorials/01-lennard_jones/Makefile
config.status: creating doc/tutorials/02-charged_system/Makefile
config.status: creating doc/tutorials/03-object_in_fluid/Makefile
config.status: creating doc/tutorials/04-lattice_boltzmann/Makefile
config.status: creating doc/tutorials/05-raspberry_electrophoresis/Makefile
config.status: creating doc/tutorials/06-active_matter/Makefile
config.status: creating doc/tutorials/07-electrokinetics/Makefile
config.status: creating doc/tutorials/08-visualization/Makefile
config.status: creating doc/latexit.sh
config.status: creating testsuite/runtest.sh
config.status: creating tools/es_mpiexec
config.status: creating src/python/pypresso
config.status: creating src/acconfig.hpp
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing myconfig-sample.hpp commands
****************************************************************
*                   Configuration summary                      *
****************************************************************
platform detected       = x86_64-suse-linux-gnu
package version         = 3.4-dev-1931-gc9955ae
development sources     = yes

Compiler
--------
compiler                = mpic++
linker                  = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64
c++ compiler flags      =  -std=c++11
c++ preprocessor flags  =  -I/usr/local/cuda/include
linker flags            =  -L/usr/local/cuda/lib64
libraries               = -lhdf5 -ltcl8.6 -lcurand -lcublas -lcufft -lcudart 
-lfftw3  -lm -ldl
using debug flags       = 
using profiling flags   = 

cython complier         = 
cython preproc flags    = 


Libraries
---------
FFTW                    = yes
efence                  = no
h5md                    = yes
boost_test              = yes

Cuda
----
CUDA compiler           = /usr/local/cuda/bin/nvcc
CUDA flags              =  -O3 -std c++11 --ptxas-options=-v -gencode 
arch=compute_20,code=compute_20

Tcl/Tk
------
Tcl version             = tcl8.6
Tk version              = none

Python
------
python                  = /usr/bin/python -B
build python interface  = 

Other settings
--------------
config                  = myconfig.hpp
installation prefix     = /home/jenkins/Espresso
number of test tasks    = 8
mympiexec               = 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/mympiexec.sh>
mpiexec                 = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec
pdflatex                = /group/icp/texlive/bin/x86_64-linux/pdflatex
makeindex               = /group/icp/texlive/bin/x86_64-linux/makeindex
bibtex                  = /group/icp/texlive/bin/x86_64-linux/bibtex
doxygen                 = /usr/bin/doxygen
dot                     = /usr/bin/dot

Not building Python interface.
****************************************************************
* DEPRECATION WARNING: The autoconf/autotools build system     *
* will be replaced by cmake in the future.                     *
* New features are only available via cmake.                   *
****************************************************************
END CONFIGURE
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/>
+ maintainer/jenkins/build.sh
17900 (process ID) old priority 0, new priority 5
  
srcdir=<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/>
  
builddir=<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/>
  insource=true
  parallelism=3core
START BUILD
  myconfig=immersed_boundaries
  build_procs=4
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/>
 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/>
Copying immersed_boundaries.hpp to 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/myconfig.hpp...>
>make -j 4 
Making all in config
make[1]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/config'>
make[1]: Nothing to be done for 'all'.
make[1]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/config'>
Making all in src
make[1]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/src'>
make  all-recursive
make[2]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/src'>
Making all in core
make[3]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/src/core'>
  GEN      config-features.hpp
  GEN      myconfig-final.hpp <= ../../myconfig.hpp
  GEN      config-features.cpp
make  all-recursive
make[4]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/src/core'>
Making all in unit_tests
make[5]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/src/core/unit_tests'>
make[5]: Nothing to be done for 'all'.
make[5]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/src/core/unit_tests'>
make[5]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/src/core'>
  CXX      config-features.lo
  CXX      cells.lo
  CXX      communication.lo
  CXX      collision.lo
  CXX      comfixed.lo
In file included from domain_decomposition.hpp:62:0,
                 from cells.cpp:40:
thermostat.hpp: In function 'void friction_thermo_langevin(Particle*)':
thermostat.hpp:247:3: error: 'langevin_temp_coeff' was not declared in this 
scope
   langevin_temp_coeff = 24.0;
   ^
In file included from domain_decomposition.hpp:62:0,
                 from collision.cpp:25:
thermostat.hpp: In function 'void friction_thermo_langevin(Particle*)':
thermostat.hpp:247:3: error: 'langevin_temp_coeff' was not declared in this 
scope
   langevin_temp_coeff = 24.0;
   ^
Makefile:1142: recipe for target 'cells.lo' failed
make[5]: *** [cells.lo] Error 1
make[5]: *** Waiting for unfinished jobs....
Makefile:1142: recipe for target 'collision.lo' failed
make[5]: *** [collision.lo] Error 1
In file included from domain_decomposition.hpp:62:0,
                 from iccp3m.hpp:61,
                 from forces.hpp:31,
                 from communication.cpp:37:
thermostat.hpp: In function 'void friction_thermo_langevin(Particle*)':
thermostat.hpp:247:3: error: 'langevin_temp_coeff' was not declared in this 
scope
   langevin_temp_coeff = 24.0;
   ^
Makefile:1142: recipe for target 'communication.lo' failed
make[5]: *** [communication.lo] Error 1
make[5]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/src/core'>
Makefile:1167: recipe for target 'all-recursive' failed
make[4]: *** [all-recursive] Error 1
make[4]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/src/core'>
Makefile:815: recipe for target 'all' failed
make[3]: *** [all] Error 2
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/src/core'>
Makefile:449: recipe for target 'all-recursive' failed
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/src'>
Makefile:387: recipe for target 'all' failed
make[1]: *** [all] Error 2
make[1]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=immersed_boundaries,parallelism=3core/ws/src'>
Makefile:475: recipe for target 'all-recursive' failed
make: *** [all-recursive] Error 1
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE