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[Espressomd-maintainer] Build failed in Jenkins: master-multiconfig-comp
From: |
Jenkins Demon |
Subject: |
[Espressomd-maintainer] Build failed in Jenkins: master-multiconfig-compile » tunableslip #43 |
Date: |
Mon, 2 May 2016 16:24:44 +0200 (CEST) |
See
<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/43/changes>
Changes:
[Florian Weik] random: Reimplementet state gathering.
[Florian Weik] random: Reimplementet state gathering.
[Florian Weik] random:...
[Florian Weik] random: State can now be checkpointed again.
[Florian Weik] maintainer: NEWS
[Florian Weik] travis: Added boost mpi.
[Florian Weik] random: Fix const issue.
[Florian Weik] testsuite: Made langevin_per_particle test deterministic. This
time for
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[...truncated 516 lines...]
CXX angle_cossquare.lo
CXX angledist.lo
CXX dihedral.lo
CXX endangledist.lo
CXX fene.lo
CXX harmonic_dumbbell.lo
CXX harmonic.lo
CXX quartic.lo
CXX overlap.lo
CXX umbrella.lo
CXX bonded_coulomb.lo
CXX subt_lj.lo
CXX object-in-fluid/oif_global_forces.lo
CXX object-in-fluid/oif_local_forces.lo
CXX object-in-fluid/out_direction.lo
CXX hydrogen_bond.lo
CXX twist_stack.lo
CXX debye_hueckel.lo
CXX elc.lo
CXX magnetic_non_p3m_methods.lo
CXX mdlc_correction.lo
CXX maggs.lo
CXX mmm1d.lo
CXX mmm2d.lo
CXX mmm-common.lo
CXX p3m.lo
CXX p3m-common.lo
CXX p3m-dipolar.lo
CXX reaction_field.lo
GEN config-version.cpp
NVCC cuda_init_cuda.lo
NVCC cuda_common_cuda.lo
NVCC electrokinetics_cuda.lo
NVCC fd-electrostatics_cuda.lo
NVCC lbgpu_cuda.lo
NVCC p3m_gpu_cuda.lo
NVCC EspressoSystemInterface_cuda.lo
NVCC integrate_sd_cuda.lo
NVCC integrate_sd_cuda_kernel.lo
NVCC integrate_sd_cuda_debug.lo
NVCC integrate_sd_matrix.lo
NVCC integrate_sd_cuda_device.lo
NVCC actor/Mmm1dgpuForce_cuda.lo
NVCC actor/EwaldGPU_cuda.lo
NVCC actor/HarmonicWell_cuda.lo
NVCC immersed_boundary/ibm_cuda.lo
NVCC actor/DipolarDirectSum_cuda.lo
NVCC actor/HarmonicOrientationWell_cuda.lo
NVCC p3m_gpu_error_cuda.lo
CXX utils/statistics/RunningAverage.lo
CXX object-in-fluid/affinity.lo
CXX object-in-fluid/membrane_collision.lo
CXX immersed_boundary/ibm_main.lo
CXX immersed_boundary/ibm_triel.lo
CXX immersed_boundary/ibm_volume_conservation.lo
CXX immersed_boundary/ibm_tribend.lo
CXX immersed_boundary/ibm_cuda_interface.lo
CXX actor/ActorList.lo
CXX actor/HarmonicWell.lo
CXX actor/HarmonicOrientationWell.lo
CXX actor/Mmm1dgpuForce.lo
CXX actor/EwaldGPU.lo
CXX actor/DipolarDirectSum.lo
CXX config-version.lo
CXXLD libEspresso.la
make[5]: Leaving directory
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/ws/src/core'>
make[4]: Leaving directory
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/ws/src/core'>
make[3]: Leaving directory
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/ws/src/core'>
Making all in tcl
make[3]: Entering directory
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/ws/src/tcl'>
CXX bin_tcl.lo
CXX binary_file_tcl.lo
CXX blockfile_tcl.lo
CXX h5mdfile_tcl.lo
CXX rotate_system_tcl.lo
CXX readpdb_tcl.lo
CXX cells_tcl.lo
CXX channels_tcl.lo
CXX collision_tcl.lo
CXX comfixed_tcl.lo
CXX comforce_tcl.lo
CXX config_tcl.lo
CXX constraint_tcl.lo
CXX domain_decomposition_tcl.lo
CXX electrokinetics_tcl.lo
CXX external_potential_tcl.lo
CXX energy_tcl.lo
CXX galilei_tcl.lo
CXX global_tcl.lo
CXX grid_tcl.lo
CXX iccp3m_tcl.lo
CXX imd_tcl.lo
CXX initialize_interpreter.lo
CXX integrate_tcl.lo
CXX interaction_data_tcl.lo
CXX lb-boundaries_tcl.lo
CXX lb_tcl.lo
CXX lees_edwards_tcl.lo
CXX metadynamics_tcl.lo
CXX nemd_tcl.lo
CXX mol_cut_tcl.lo
CXX parser.lo
CXX particle_data_tcl.lo
CXX polymer_tcl.lo
CXX pressure_tcl.lo
CXX random_tcl.lo
CXX reaction_tcl.lo
CXX rattle_tcl.lo
CXX statistics_chain_tcl.lo
CXX statistics_cluster_tcl.lo
CXX statistics_correlation_tcl.lo
CXX statistics_fluid_tcl.lo
CXX statistics_observable_tcl.lo
CXX statistics_wallstuff_tcl.lo
CXX statistics_tcl.lo
CXX thermostat_tcl.lo
CXX topology_tcl.lo
CXX tuning_tcl.lo
CXX uwerr_tcl.lo
CXX virtual_sites_com_tcl.lo
CXX ghmc_tcl.lo
CXX twist_stack_tcl.lo
CXX hydrogen_bond_tcl.lo
CXX minimize_energy_tcl.lo
CXX integrate_sd_tcl.lo
CXX mpiio_tcl.lo
CXX bmhtf-nacl_tcl.lo
CXX buckingham_tcl.lo
CXX cos2_tcl.lo
CXX dpd_tcl.lo
CXX forcecap_tcl.lo
CXX gaussian_tcl.lo
CXX gb_tcl.lo
CXX hat_tcl.lo
CXX hertzian_tcl.lo
CXX lj_tcl.lo
CXX ljangle_tcl.lo
CXX ljcos2_tcl.lo
CXX ljcos_tcl.lo
CXX ljgen_tcl.lo
CXX morse_tcl.lo
CXX soft_sphere_tcl.lo
CXX steppot_tcl.lo
CXX tab_tcl.lo
CXX tunable_slip_tcl.lo
CXX angle_tcl.lo
CXX angle_harmonic_tcl.lo
CXX angle_cosine_tcl.lo
CXX angle_cossquare_tcl.lo
CXX angledist_tcl.lo
CXX dihedral_tcl.lo
CXX endangledist_tcl.lo
CXX fene_tcl.lo
CXX harmonic_dumbbell_tcl.lo
CXX harmonic_tcl.lo
CXX quartic_tcl.lo
CXX bonded_coulomb_tcl.lo
CXX overlap_tcl.lo
CXX subt_lj_tcl.lo
CXX umbrella_tcl.lo
CXX object-in-fluid/oif_global_forces_tcl.lo
CXX object-in-fluid/oif_local_forces_tcl.lo
CXX object-in-fluid/out_direction_tcl.lo
CXX debye_hueckel_tcl.lo
CXX elc_tcl.lo
CXX magnetic_non_p3m_methods_tcl.lo
CXX maggs_tcl.lo
CXX mmm1d_tcl.lo
CXX mmm2d_tcl.lo
CXX p3m-dipolar_tcl.lo
CXX p3m_tcl.lo
CXX reaction_field_tcl.lo
CXX mdlc_correction_tcl.lo
CXX cuda_init_tcl.lo
CXX Espresso_install-scriptsdir.o
CXX Espresso_install-main.o
NVCC cuda_workaround.o
CXX Espresso-scriptsdir.o
CXX Espresso-main.o
CXX object-in-fluid/affinity_tcl.lo
CXX object-in-fluid/membrane_collision_tcl.lo
CXX immersed_boundary/ibm_triel_tcl.lo
CXX immersed_boundary/ibm_volume_conservation_tcl.lo
CXX immersed_boundary/ibm_tribend_tcl.lo
CXX actor/Mmm1dgpu_tcl.lo
CXX actor/Ewaldgpu_tcl.lo
CXX actor/DipolarDirectSum_tcl.lo
CXX actor/HarmonicWell_tcl.lo
CXX actor/HarmonicOrientationWell_tcl.lo
CXXLD libEspressoTcl.la
CXXLD Espresso.install
CXXLD Espresso
../core/.libs/libEspresso.so: undefined reference to
`boost::mpi::communicator::communicator(ompi_communicator_t* const&,
boost::mpi::comm_create_kind)'
../core/.libs/libEspresso.so: undefined reference to
`boost::archive::detail::basic_iarchive::basic_iarchive(unsigned int)'
../core/.libs/libEspresso.so: undefined reference to
`boost::mpi::communicator::operator ompi_communicator_t*() const'
../core/.libs/libEspresso.so: undefined reference to
`boost::archive::detail::shared_ptr_helper::shared_ptr_helper()'
../core/.libs/libEspresso.so: undefined reference to
`boost::archive::detail.::.shared_ptr_helper/::core~/shared_ptr_helper.(libs/)libEspresso.so'
:. .undefined/ corereference/ .tolibs /`libEspresso.soboost:: :undefinedmpi
::referencecommunicator :to: `communicatorboost(:ompi_communicator_t:*mpi
:const:&,exception :boost::exception:(charmpi :const:*comm_create_kind,) 'int
).'./
core./../libscore//libEspresso.so.:libs /undefinedlibEspresso.so :
referenceundefined to reference`boost :to: archive`:vtable: detail:for:
basic_iarchiveboost::::basic_iarchivempi(:unsigned: exceptionint')
'.
../.core//core./libs./libslibEspresso.so/:libEspresso.so :undefined
undefinedreference referenceto to` `typeinfoboost :for:
mpiboost::::communicatorarchive::::operatordetail
:ompi_communicator_t*:(basic_iarchive)'
..const/'core
/...libs//core/libEspresso.so.:libs /undefined libEspresso.soreference:
toundefined `referenceboost :to:
`mpiboost::::communicatorarchive:::communicator:(detail:):'shared_ptr_helper
:.:.shared_ptr_helper/(core)/'.
libs./.libEspresso.so/:core /undefined. libs/referencelibEspresso.so :to
undefined` boostreference: :tompi:
:`boostexception::::archive~:exception:(detail)':
:.shared_ptr_helper.:/:core~/shared_ptr_helper(.)libs'/
libEspresso.so.:. /undefinedcore /reference.libs /tolibEspresso.so :`
boostundefined: :referencempi to:
:`exceptionboost::::~mpiexception:(:)'exception
:.:.exception/(corechar/ .constlibs*/,libEspresso.so :int )undefined'
reference. .to/ core`/boost.:libs:/archivelibEspresso.so::: detailundefined:
:reference basic_oarchiveto: :`basic_oarchivevtable( unsignedfor intboost):':
mpi.:./:coreexception'/
..libs.//libEspresso.socore:/ .undefinedlibs /reference libEspresso.soto :`
undefinedboost: :referencearchive :to: detail`::typeinfobasic_oarchive :for:
end_preambleboost():':
archive.:.:/detailcore:/:.basic_iarchivelibs'/
libEspresso.so.:. /undefined corereference/ .tolibs /`libEspresso.sovoid:
boost:undefined: mpireference: to:
communicator`:boost::send:<mpiboost::::communicatormpi::::communicator(packed_oarchive)'>
(.int.,/ coreint/,. libsboost/:libEspresso.so::mpi :undefined:
packed_oarchivereference constto& )` boostconst:':
mpi.:.:/exceptioncore:/:.~libsexception/(libEspresso.so):'
undefined. .reference/ coreto/ .`libsboost/:libEspresso.so::mpi :undefined:
statusreference boostto:
:`mpiboost::::communicatormpi::::recvexception<:boost::~:exceptionmpi(:):'packed_iarchive
>.(.int/,core /int.,libs /boostlibEspresso.so::: mpiundefined: :reference
>packed_iarchiveto& )` boostconst:':
archive.:.:/detailcore:/:.basic_oarchivelibs::/basic_oarchivelibEspresso.so(:unsigned
undefinedint )reference'
to. .`/typeinfocore/ .forlibs /boostlibEspresso.so::: mpiundefined: reference:
exceptionto'
`.boost.:/:corearchive/:.:libsdetail/::libEspresso.sobasic_oarchive::
:undefinedend_preamble (reference) 'to
.`.boost/:core/:.archivelibs:/:detaillibEspresso.so:::basic_iarchive
:undefined: ~referencebasic_iarchive (to )`'void
.boost.:/:corempi/:.:libscommunicator/:libEspresso.so::send <undefinedboost
:reference: tompi :`:typeinfopacked_oarchive >for( intboost,: :intarchive,:
:detailboost::::basic_oarchivempi':
:.packed_oarchive. /constcore&/). libsconst/'
libEspresso.so.:. /coreundefined/ .referencelibs /tolibEspresso.so :`
boostundefined :reference: archiveto:
:`detailboost::::basic_oarchivempi::::~statusbasic_oarchive (boost):':
mpi::communicator::recv<boost::mpi::packed_iarchive>(int, int,
boost::mpi::packed_iarchive&) const'
../core/.libs/libEspresso.so: undefined reference to `typeinfo for
boost::mpi::exception'
../core/.libs/libEspresso.so: undefined reference to `boostcollect2: error: ld
returned 1 exit status
::archive::detail::basic_iarchive::~basic_iarchive()'
../core/.libs/libEspresso.so: undefined reference to `typeinfo for
boost::archive::detail::basic_oarchive'
../core/.libs/libEspresso.so: undefined reference to
`boost::archive::detail::basic_oarchive::~basic_oarchive()'
collect2: error: ld returned 1 exit status
Makefile:888: recipe for target 'Espresso.install' failed
make[3]: *** [Espresso.install] Error 1
make[3]: *** Waiting for unfinished jobs....
Makefile:884: recipe for target 'Espresso' failed
make[3]: *** [Espresso] Error 1
make[3]: Leaving directory
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/ws/src/tcl'>
Makefile:449: recipe for target 'all-recursive' failed
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/ws/src'>
Makefile:387: recipe for target 'all' failed
make[1]: *** [all] Error 2
make[1]: Leaving directory
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/ws/src'>
Makefile:475: recipe for target 'all-recursive' failed
make: *** [all-recursive] Error 1
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE
- [Espressomd-maintainer] Build failed in Jenkins: master-multiconfig-compile » tunableslip #43,
Jenkins Demon <=