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[Espressomd-maintainer] Build failed in Jenkins: master-build-check #704
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From: |
Jenkins Demon |
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Subject: |
[Espressomd-maintainer] Build failed in Jenkins: master-build-check #704 |
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Date: |
Wed, 18 May 2016 14:55:08 +0200 (CEST) |
See <http://espressomd.org/jenkins/job/master-build-check/704/changes>
Changes:
[robin.hobil] Closes #569: require declaration in _system.System
[robin.hobil] changed try, except into if-statement
[robin.hobil] Added create_attr function to System
[robin.hobil] indentation
------------------------------------------
[...truncated 297 lines...]
****************************************************************
checking whether to build with h5md support... yes
checking for libhdf5... yes
checking for hdf5.h... yes
****************************************************************
* Other settings *
****************************************************************
checking whether to use efence... no
checking whether the variable MYCONFIG is set... no
checking the number of available CPUs... 8
****************************************************************
* Creating output files *
****************************************************************
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config/Makefile
config.status: creating config/myconfig-sample-header.hpp
config.status: creating src/Makefile
config.status: creating src/core/Makefile
config.status: creating src/tcl/Makefile
config.status: creating src/python/espressomd/Makefile
config.status: creating src/core/unit_tests/Makefile
config.status: creating tools/Makefile
config.status: creating scripts/Makefile
config.status: creating testsuite/Makefile
config.status: creating testsuite/tcl/Makefile
config.status: creating testsuite/python/Makefile
config.status: creating doc/Makefile
config.status: creating doc/logo/Makefile
config.status: creating doc/ug/Makefile
config.status: creating doc/dg/Makefile
config.status: creating doc/doxygen/Makefile
config.status: creating doc/tutorials/Makefile
config.status: creating doc/tutorials/00-building_espresso/Makefile
config.status: creating doc/tutorials/01-lennard_jones/Makefile
config.status: creating doc/tutorials/02-charged_system/Makefile
config.status: creating doc/tutorials/03-object_in_fluid/Makefile
config.status: creating doc/tutorials/04-lattice_boltzmann/Makefile
config.status: creating doc/tutorials/05-raspberry_electrophoresis/Makefile
config.status: creating doc/tutorials/06-active_matter/Makefile
config.status: creating doc/tutorials/07-electrokinetics/Makefile
config.status: creating doc/tutorials/08-visualization/Makefile
config.status: creating doc/latexit.sh
config.status: creating testsuite/tcl/runtest.sh
config.status: creating testsuite/python/runtest.sh
config.status: creating tools/es_mpiexec
config.status: creating src/python/pypresso
config.status: creating src/acconfig.hpp
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing myconfig-sample.hpp commands
configure: WARNING: unrecognized options: --with-mpi
****************************************************************
* Configuration summary *
****************************************************************
platform detected = x86_64-suse-linux-gnu
package version = 3.4-dev-2172-gb863567
development sources = yes
Compiler
--------
compiler = mpic++
linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64
c++ compiler flags = -std=c++11
c++ preprocessor flags = -I/usr/local/cuda/include
linker flags = -L/usr/local/cuda/lib64
libraries = -lhdf5 -ltcl8.6 -lcurand -lcublas -lcufft -lcudart
-lfftw3 -lm -ldl -lboost_mpi-mt
using debug flags =
using profiling flags =
cython complier =
cython preproc flags =
Libraries
---------
FFTW = yes
efence = no
h5md = yes
boost_test =
Cuda
----
CUDA compiler = /usr/local/cuda/bin/nvcc
CUDA flags = -O3 -std c++11 --ptxas-options=-v -gencode
arch=compute_20,code=compute_20
Tcl/Tk
------
Tcl version = tcl8.6
Tk version = none
Python
------
python = /usr/bin/python -B
build python interface =
Other settings
--------------
config = myconfig.hpp
installation prefix = /home/jenkins/Espresso
number of test tasks = 8
mympiexec =
mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec
pdflatex = /group/icp/texlive/bin/x86_64-linux/pdflatex
makeindex = /group/icp/texlive/bin/x86_64-linux/makeindex
bibtex = /group/icp/texlive/bin/x86_64-linux/bibtex
doxygen = /usr/bin/doxygen
dot = /usr/bin/dot
Not building Python interface.
****************************************************************
* DEPRECATION WARNING: The autoconf/autotools build system *
* will be replaced by cmake in the future. *
* New features are only available via cmake. *
****************************************************************
END CONFIGURE
<http://espressomd.org/jenkins/job/master-build-check/ws/>
+ maintainer/jenkins/build.sh
srcdir=<http://espressomd.org/jenkins/job/master-build-check/ws/>
builddir=<http://espressomd.org/jenkins/job/master-build-check/ws/>
insource=true
START BUILD
myconfig=maxset
build_procs=1
<http://espressomd.org/jenkins/job/master-build-check/ws/>
<http://espressomd.org/jenkins/job/master-build-check/ws/>
Copying maxset.hpp to
<http://espressomd.org/jenkins/job/master-build-check/ws/myconfig.hpp...>
>make -j 1
Making all in config
make[1]: Entering directory
'<http://espressomd.org/jenkins/job/master-build-check/ws/config'>
make[1]: Nothing to be done for 'all'.
make[1]: Leaving directory
'<http://espressomd.org/jenkins/job/master-build-check/ws/config'>
Making all in src
make[1]: Entering directory
'<http://espressomd.org/jenkins/job/master-build-check/ws/src'>
make all-recursive
make[2]: Entering directory
'<http://espressomd.org/jenkins/job/master-build-check/ws/src'>
Making all in core
make[3]: Entering directory
'<http://espressomd.org/jenkins/job/master-build-check/ws/src/core'>
GEN myconfig-final.hpp <= ../../myconfig.hpp
GEN config-features.hpp
make all-recursive
make[4]: Entering directory
'<http://espressomd.org/jenkins/job/master-build-check/ws/src/core'>
make[5]: Entering directory
'<http://espressomd.org/jenkins/job/master-build-check/ws/src/core'>
CXX config-features.lo
CXX cells.lo
CXX collision.lo
CXX communication.lo
CXX comfixed.lo
CXX comforce.lo
CXX constraint.lo
CXX cuda_interface.lo
CXX cuda_init.lo
CXX debug.lo
CXX domain_decomposition.lo
CXX electrokinetics_pdb_parse.lo
CXX energy.lo
CXX external_potential.lo
CXX errorhandling.lo
CXX fft.lo
CXX fft-common.lo
CXX fft-dipolar.lo
CXX forcecap.lo
CXX forces.lo
CXX galilei.lo
CXX ghosts.lo
CXX global.lo
CXX grid.lo
CXX halo.lo
CXX iccp3m.lo
CXX imd.lo
CXX initialize.lo
CXX integrate.lo
CXX interaction_data.lo
CXX lattice.lo
CXX layered.lo
CXX lb.lo
CXX lb-boundaries.lo
CXX lbgpu.lo
CXX lees_edwards.lo
CXX lees_edwards_domain_decomposition.lo
CXX lees_edwards_comms_manager.lo
CXX metadynamics.lo
CXX minimize_energy.lo
CXX modes.lo
CXX molforces.lo
CXX mol_cut.lo
CXX nemd.lo
CXX npt.lo
CXX nsquare.lo
CXX particle_data.lo
CXX polymer.lo
CXX polynom.lo
CXX pressure.lo
CXX random.lo
CXX rattle.lo
CXX reaction.lo
CXX readpdb.lo
CXX Ringbuffer.lo
CXX rotate_system.lo
CXX rotation.lo
CXX RuntimeError.lo
CXX RuntimeErrorCollector.lo
CXX RuntimeErrorStream.lo
CXX scafacos.lo
CXX specfunc.lo
CXX statistics.lo
CXX statistics_chain.lo
CXX statistics_cluster.lo
CXX statistics_correlation.lo
CXX statistics_fluid.lo
CXX statistics_molecule.lo
CXX statistics_observable.lo
CXX statistics_wallstuff.lo
CXX thermostat.lo
CXX topology.lo
CXX tuning.lo
CXX utils.lo
CXX uwerr.lo
CXX verlet.lo
CXX virtual_sites.lo
CXX virtual_sites_com.lo
CXX virtual_sites_relative.lo
CXX vmdsock.lo
CXX ghmc.lo
CXX Vector.lo
CXX SystemInterface.lo
CXX integrate_sd.lo
CXX EspressoSystemInterface.lo
CXX PdbParser.lo
make[5]: *** No rule to make target 'utils/statistics/RunningAverage.cpp',
needed by 'utils/statistics/RunningAverage.lo'. Stop.
make[5]: Leaving directory
'<http://espressomd.org/jenkins/job/master-build-check/ws/src/core'>
Makefile:1053: recipe for target 'all-recursive' failed
make[4]: *** [all-recursive] Error 1
make[4]: Leaving directory
'<http://espressomd.org/jenkins/job/master-build-check/ws/src/core'>
Makefile:711: recipe for target 'all' failed
make[3]: *** [all] Error 2
make[3]: Leaving directory
'<http://espressomd.org/jenkins/job/master-build-check/ws/src/core'>
Makefile:455: recipe for target 'all-recursive' failed
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory
'<http://espressomd.org/jenkins/job/master-build-check/ws/src'>
Makefile:393: recipe for target 'all' failed
make[1]: *** [all] Error 2
make[1]: Leaving directory
'<http://espressomd.org/jenkins/job/master-build-check/ws/src'>
Makefile:481: recipe for target 'all-recursive' failed
make: *** [all-recursive] Error 1
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE
Archiving artifacts