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[Espressomd-maintainer] Build failed in Jenkins: master-python-interface


From: Jenkins Demon
Subject: [Espressomd-maintainer] Build failed in Jenkins: master-python-interface #552
Date: Mon, 20 Jun 2016 09:22:34 +0200 (CEST)

See <http://espressomd.org/jenkins/job/master-python-interface/552/changes>

Changes:

[m.kuron] Demo with online visualization and MIDI control

[m.kuron] More features

[m.kuron] Temperature and pressure plots in LJ demo Visualization with holes in

[m.kuron] Phase diagram

[m.kuron] switchable NPT ensemble, not working

[phy79182] fixed LBFluid_GPU

[m.kuron] Integer division fix

[m.kuron] Switch to Mackie Control Universal MIDI protocol

[mkuron] Push the values to the controller when the MIDI device is changed

[kai] Python interface for [lbnode x y z print u] command.

[kai] Renamed method according to what it's actually doing.

[kai] Fixed include of get_u function.

[Florian Weik] utils: Added implementation of make_unique analog to 
std::make_shared,

[alexander.weyman] added lj-demo.py (Tag der Wissenschaft 2016)

[alexander.weyman] change particle coordinates (PBC)

[alexander.weyman] make lj-demo work without plugged in midi device

[alexander.weyman] last working version (tested under ubuntu)

[Florian Weik] communication: Fixed use after free bug (of the boost 
communicator).

[Florian Weik] communication: Added const cast to MPI calls for old mpi 
versions.

[mkuron] Importing the MIDI module

[Florian Weik] testsuite: Replaced tcl rng (rand()) by t_random.

[Florian Weik] testsuite: Speed up p3m stress test.

[Florian Weik] random: Apparently 0 is not a good seed, so we use 1 + mpi rank.

------------------------------------------
[...truncated 12 lines...]
+ export with_tcl=false
+ with_tcl=false
+ export with_python_interface=true
+ with_python_interface=true
+ source maintainer/jenkins/common.sh
+++ ps -o nice= 2949
++ ((   0 < 5 ))
++ renice -n 5 2949
2949 (process ID) old priority 0, new priority 5
++ '[' -z '' ']'
++ insource=true
++ '[' -z '' ']'
+++ pwd
++ srcdir=<http://espressomd.org/jenkins/job/master-python-interface/ws/>
++ true
++ builddir=<http://espressomd.org/jenkins/job/master-python-interface/ws/>
++ outp srcdir builddir insource
++ for p in '$*'
++ echo '  
srcdir=<http://espressomd.org/jenkins/job/master-python-interface/ws/'>
  srcdir=<http://espressomd.org/jenkins/job/master-python-interface/ws/>
++ for p in '$*'
++ echo '  
builddir=<http://espressomd.org/jenkins/job/master-python-interface/ws/'>
  builddir=<http://espressomd.org/jenkins/job/master-python-interface/ws/>
++ for p in '$*'
++ echo '  insource=true'
  insource=true
++ '[' '!' -e 
<http://espressomd.org/jenkins/job/master-python-interface/ws/configure.ac> ']'
++ true
++ '[' -n '' ']'
+ maintainer/jenkins/configure.sh
  srcdir=<http://espressomd.org/jenkins/job/master-python-interface/ws/>
  builddir=<http://espressomd.org/jenkins/job/master-python-interface/ws/>
  insource=true
START CONFIGURE
  configure_params=
  configure_vars=
  with_cuda=true
  with_mpi=true
  with_fftw=true
  with_tcl=false
  with_python_interface=true
  with_h5md=true
<http://espressomd.org/jenkins/job/master-python-interface/ws/> 
<http://espressomd.org/jenkins/job/master-python-interface/ws/>
><http://espressomd.org/jenkins/job/master-python-interface/ws/configure> 
>--with-python-interface --without-tcl --with-fftw --with-cuda --with-h5md 
>--with-mpi --enable-silent-rules  
configure: WARNING: unrecognized options: --with-mpi
configure: loading site script /usr/share/site/x86_64-unknown-linux-gnu
checking build system type... x86_64-suse-linux-gnu
checking host system type... x86_64-suse-linux-gnu
checking target system type... x86_64-suse-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
<http://espressomd.org/jenkins/job/master-python-interface/ws/config/missing>: 
Unknown '--is-lightweight' option
Try 
'<http://espressomd.org/jenkins/job/master-python-interface/ws/config/missing> 
--help' for more information
configure: WARNING: 'missing' script is too old or missing
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether UID '9017' is supported by ustar format... yes
checking whether GID '100' is supported by ustar format... yes
checking how to create a ustar tar archive... gnutar
checking whether to enable maintainer-specific portions of Makefiles... no
checking whether make supports nested variables... (cached) yes
checking whether we are using development sources... yes
****************************************************************
*      Checking compiler characteristics and MPI support       *
****************************************************************
checking for style of include used by make... GNU
checking for mpic++... mpic++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking dependency style of mpic++... gcc3
checking for function MPI_Init... yes
checking for mpi.h... yes
checking for mpiexec... /usr/lib64/mpi/gcc/openmpi/bin/mpiexec
checking whether mpic++ can get a pretty function name... __PRETTY_FUNCTION__
checking whether mpic++ supports C++11 features by default... no
checking whether mpic++ supports C++11 features with -std=c++11... yes
checking whether mpic++ understands -c and -o together... yes
****************************************************************
*                  Checking for programs                       *
****************************************************************
checking how to print strings... printf
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking dependency style of gcc... gcc3
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/x86_64-suse-linux/bin/ld
checking if the linker (/usr/x86_64-suse-linux/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 3458764513820540925
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-suse-linux-gnu file names to 
x86_64-suse-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-suse-linux-gnu file names to toolchain format... 
func_convert_file_noop
checking for /usr/x86_64-suse-linux/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) 
supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking how to run the C++ preprocessor... mpic++ -E
checking for ld used by mpic++... /usr/x86_64-suse-linux/bin/ld -m elf_x86_64
checking if the linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) is GNU 
ld... yes
checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m 
elf_x86_64) supports shared libraries... yes
checking for mpic++ option to produce PIC... -fPIC -DPIC
checking if mpic++ PIC flag -fPIC -DPIC works... yes
checking if mpic++ static flag -static works... no
checking if mpic++ supports -c -o file.o... yes
checking if mpic++ supports -c -o file.o... (cached) yes
checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m 
elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for gawk... (cached) gawk
checking for egrep... (cached) /usr/bin/grep -E
checking whether ln -s works... yes
checking for doxygen... /usr/bin/doxygen
checking for dot... /usr/bin/dot
checking for pdflatex... /group/icp/texlive/bin/x86_64-linux/pdflatex
checking for makeindex... /group/icp/texlive/bin/x86_64-linux/makeindex
checking for bibtex... /group/icp/texlive/bin/x86_64-linux/bibtex
****************************************************************
*               Checking for standard headers                  *
****************************************************************
checking for ANSI C header files... (cached) yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking float.h usability... yes
checking float.h presence... yes
checking for float.h... yes
checking for inttypes.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for strings.h... (cached) yes
checking sys/file.h usability... yes
checking sys/file.h presence... yes
checking for sys/file.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking for unistd.h... (cached) yes
****************************************************************
*               Checking for standard functions                *
****************************************************************
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for working memcmp... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible realloc... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking for sys/socket.h... (cached) yes
checking types of arguments for select... int,fd_set *,struct timeval *
checking for size_t... yes
checking for working strtod... yes
checking for atexit... yes
checking for floor... yes
checking for getcwd... yes
checking for gethostbyname... yes
checking for memset... yes
checking for pow... yes
checking for rint... yes
checking for select... yes
checking for socket... yes
checking for sqrt... yes
****************************************************************
*         Checking for required tools and libraries            *
****************************************************************
checking whether to use FFTW... yes
checking for libfftw3... yes
checking for fftw3.h... yes
checking whether to use CUDA... yes
checking for nvcc... no
checking if no supports -c -o file.o... no
checking if no supports -c -o file.o... (cached) no
checking whether the no linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) 
supports shared libraries... yes
checking how to hardcode library paths into programs... immediate
configure: error: in 
`<http://espressomd.org/jenkins/job/master-python-interface/ws/'>:
configure: error: CUDA compiler nvcc was not found, specify location using the 
NVCC variable
See `config.log' for more details
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE
Archiving artifacts



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