[Espressomd-maintainer] Build failed in Jenkins: master-nightly-distcheck #347

[Jenkins Demon]

See <http://espressomd.org/jenkins/job/master-nightly-distcheck/347/changes>

Changes:

[phy79182] replaced syntax

------------------------------------------
[...truncated 270 lines...]
checking for hdf5.h... yes
****************************************************************
*                   Other settings                             *
****************************************************************
checking whether to use efence... no
checking whether the variable MYCONFIG is set... no
checking the number of available CPUs... 8 
****************************************************************
*                   Creating output files                      *
****************************************************************
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config/Makefile
config.status: creating config/myconfig-sample-header.hpp
config.status: creating src/Makefile
config.status: creating src/core/Makefile
config.status: creating src/tcl/Makefile
config.status: creating src/python/espressomd/Makefile
config.status: creating src/core/unit_tests/Makefile
config.status: creating tools/Makefile
config.status: creating scripts/Makefile
config.status: creating testsuite/Makefile
config.status: creating testsuite/tcl/Makefile
config.status: creating testsuite/python/Makefile
config.status: creating doc/Makefile
config.status: creating doc/logo/Makefile
config.status: creating doc/ug/Makefile
config.status: creating doc/dg/Makefile
config.status: creating doc/doxygen/Makefile
config.status: creating doc/tutorials/Makefile
config.status: creating doc/tutorials/tcl/Makefile
config.status: creating doc/tutorials/tcl/00-building_espresso/Makefile
config.status: creating doc/tutorials/tcl/01-lennard_jones/Makefile
config.status: creating doc/tutorials/tcl/02-charged_system/Makefile
config.status: creating doc/tutorials/tcl/03-object_in_fluid/Makefile
config.status: creating doc/tutorials/tcl/04-lattice_boltzmann/Makefile
config.status: creating doc/tutorials/tcl/05-raspberry_electrophoresis/Makefile
config.status: creating doc/tutorials/tcl/06-active_matter/Makefile
config.status: creating doc/tutorials/tcl/07-electrokinetics/Makefile
config.status: creating doc/tutorials/tcl/08-visualization/Makefile
config.status: creating doc/latexit.sh
config.status: creating testsuite/tcl/runtest.sh
config.status: creating testsuite/python/runtest.sh
config.status: creating tools/es_mpiexec
config.status: creating src/python/pypresso
config.status: creating src/acconfig.hpp
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing myconfig-sample.hpp commands
configure: WARNING: unrecognized options: --with-mpi
****************************************************************
*                   Configuration summary                      *
****************************************************************
platform detected       = x86_64-suse-linux-gnu
package version         = 3.4-dev-2465-gaf567e7
development sources     = yes

Compiler
--------
compiler                = mpic++
linker                  = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64
c++ compiler flags      =  -std=c++11
c++ preprocessor flags  =  -I/usr/local/cuda/include
linker flags            =  -L/usr/local/cuda/lib64
libraries               = -lhdf5 -ltcl8.6 -lcurand -lcublas -lcufft -lcudart 
-lfftw3  -lm -ldl -lboost_mpi-mt
using debug flags       = 
using profiling flags   = 

cython complier         = 
cython preproc flags    = 


Libraries
---------
FFTW                    = yes
efence                  = no
h5md                    = yes
boost_test              = 

Cuda
----
CUDA compiler           = /usr/local/cuda/bin/nvcc
CUDA flags              =  -O3 -std c++11 --ptxas-options=-v -gencode 
arch=compute_20,code=compute_20

Tcl/Tk
------
Tcl version             = tcl8.6
Tk version              = none

Python
------
python                  = /usr/bin/python -B
build python interface  = 

Other settings
--------------
config                  = myconfig.hpp
installation prefix     = /home/jenkins/Espresso
number of test tasks    = 8
mympiexec               = 
mpiexec                 = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec
pdflatex                = /group/icp/texlive/bin/x86_64-linux/pdflatex
makeindex               = /group/icp/texlive/bin/x86_64-linux/makeindex
bibtex                  = /group/icp/texlive/bin/x86_64-linux/bibtex
doxygen                 = /usr/bin/doxygen
dot                     = /usr/bin/dot

Not building Python interface.
****************************************************************
* DEPRECATION WARNING: The autoconf/autotools build system     *
* will be replaced by cmake in the future.                     *
* New features are only available via cmake.                   *
****************************************************************
END CONFIGURE
<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/>
+ maintainer/jenkins/distcheck.sh
21596 (process ID) old priority 0, new priority 5
  srcdir=<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/>
  builddir=<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/>
  insource=true
  distcheck_flags=
<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/> 
<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/>
START DISTCHECK
>make distcheck DISTCHECK_CONFIGURE_FLAGS=""
make  dist-xz dist-gzip am__post_remove_distdir='@:'
make[1]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/'>
cd .; sh config/genversion.sh -rd > 
<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/version.txt>
if test -d "espresso-3.4-dev-2465-gaf567e7"; then find 
"espresso-3.4-dev-2465-gaf567e7" -type d ! -perm -200 -exec chmod u+w {} ';' && 
rm -rf "espresso-3.4-dev-2465-gaf567e7" || { sleep 5 && rm -rf 
"espresso-3.4-dev-2465-gaf567e7"; }; else :; fi
test -d "espresso-3.4-dev-2465-gaf567e7" || mkdir 
"espresso-3.4-dev-2465-gaf567e7"
 (cd config && make  top_distdir=../espresso-3.4-dev-2465-gaf567e7 
distdir=../espresso-3.4-dev-2465-gaf567e7/config \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[2]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/config'>
make[2]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/config'>
 (cd src && make  top_distdir=../espresso-3.4-dev-2465-gaf567e7 
distdir=../espresso-3.4-dev-2465-gaf567e7/src \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[2]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/src'>
 (cd core && make  top_distdir=../../espresso-3.4-dev-2465-gaf567e7 
distdir=../../espresso-3.4-dev-2465-gaf567e7/src/core \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[3]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/src/core'>
  GEN      config-features.cpp
  GEN      config-version.cpp
 (cd unit_tests && make  top_distdir=../../../espresso-3.4-dev-2465-gaf567e7 
distdir=../../../espresso-3.4-dev-2465-gaf567e7/src/core/unit_tests \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[4]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/src/core/unit_tests'>
make[4]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/src/core/unit_tests'>
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/src/core'>
 (cd tcl && make  top_distdir=../../espresso-3.4-dev-2465-gaf567e7 
distdir=../../espresso-3.4-dev-2465-gaf567e7/src/tcl \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[3]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/src/tcl'>
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/src/tcl'>
 (cd python/espressomd && make  
top_distdir=../../../espresso-3.4-dev-2465-gaf567e7 
distdir=../../../espresso-3.4-dev-2465-gaf567e7/src/python/espressomd \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[3]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/src/python/espressomd'>
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/src/python/espressomd'>
make[2]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/src'>
 (cd scripts && make  top_distdir=../espresso-3.4-dev-2465-gaf567e7 
distdir=../espresso-3.4-dev-2465-gaf567e7/scripts \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[2]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/scripts'>
make[2]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/scripts'>
 (cd tools && make  top_distdir=../espresso-3.4-dev-2465-gaf567e7 
distdir=../espresso-3.4-dev-2465-gaf567e7/tools \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[2]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/tools'>
make[2]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/tools'>
 (cd testsuite && make  top_distdir=../espresso-3.4-dev-2465-gaf567e7 
distdir=../espresso-3.4-dev-2465-gaf567e7/testsuite \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[2]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/testsuite'>
 (cd tcl && make  top_distdir=../../espresso-3.4-dev-2465-gaf567e7 
distdir=../../espresso-3.4-dev-2465-gaf567e7/testsuite/tcl \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[3]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/testsuite/tcl'>
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/testsuite/tcl'>
 (cd python && make  top_distdir=../../espresso-3.4-dev-2465-gaf567e7 
distdir=../../espresso-3.4-dev-2465-gaf567e7/testsuite/python \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[3]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/testsuite/python'>
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/testsuite/python'>
make[2]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/testsuite'>
 (cd doc && make  top_distdir=../espresso-3.4-dev-2465-gaf567e7 
distdir=../espresso-3.4-dev-2465-gaf567e7/doc \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[2]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/doc'>
 (cd logo && make  top_distdir=../../espresso-3.4-dev-2465-gaf567e7 
distdir=../../espresso-3.4-dev-2465-gaf567e7/doc/logo \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[3]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/doc/logo'>
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/doc/logo'>
 (cd doxygen && make  top_distdir=../../espresso-3.4-dev-2465-gaf567e7 
distdir=../../espresso-3.4-dev-2465-gaf567e7/doc/doxygen \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[3]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/doc/doxygen'>
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/doc/doxygen'>
 (cd dg && make  top_distdir=../../espresso-3.4-dev-2465-gaf567e7 
distdir=../../espresso-3.4-dev-2465-gaf567e7/doc/dg \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[3]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/doc/dg'>
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/doc/dg'>
 (cd ug && make  top_distdir=../../espresso-3.4-dev-2465-gaf567e7 
distdir=../../espresso-3.4-dev-2465-gaf567e7/doc/ug \
     am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir)
make[3]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/doc/ug'>
make  \
  top_distdir="../../espresso-3.4-dev-2465-gaf567e7" 
distdir="../../espresso-3.4-dev-2465-gaf567e7/doc/ug" \
  dist-hook
make[4]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/doc/ug'>
Assembling quickref.inp..
Running LaTeX..
sh ../latexit.sh . ug-dist 1
TEXINPUTS=.:.:<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/doc>:
ESPRESSO_VERSION=3.4-dev-2465-gaf567e7
Running LaTeX stage 1...
This is pdfTeX, Version 3.14159265-2.6-1.40.16 (TeX Live 2015) (preloaded 
format=pdflatex)
 restricted \write18 enabled.
entering extended mode
ERROR: LaTeX stage 1 failed.
These are the last 20 lines of ug-dist.log:
--------------------------------------------
[12]

! LaTeX Error: Environment lstlisting undefined.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
 ...                                              
                                                  
l.122 \begin{lstlisting}
                        [langauge=pypresso] 
Here is how much of TeX's memory you used:
 27522 strings out of 493033
 530639 string characters out of 6131886
 637330 words of memory out of 5000000
 30647 multiletter control sequences out of 15000+600000
 15111 words of font info for 55 fonts, out of 8000000 for 9000
 1141 hyphenation exceptions out of 8191
 67i,9n,66p,10454b,435s stack positions out of 5000i,500n,10000p,200000b,80000s

!  ==> Fatal error occurred, no output PDF file produced!
--------------------------------------------
Makefile:597: recipe for target 'ug-dist.pdf' failed
make[4]: *** [ug-dist.pdf] Error 1
make[4]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/doc/ug'>
Makefile:425: recipe for target 'distdir' failed
make[3]: *** [distdir] Error 2
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/doc/ug'>
Makefile:526: recipe for target 'distdir' failed
make[2]: *** [distdir] Error 1
make[2]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/doc'>
Makefile:582: recipe for target 'distdir' failed
make[1]: *** [distdir] Error 1
make[1]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-distcheck/ws/'>
Makefile:677: recipe for target 'dist' failed
make: *** [dist] Error 2
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE
Archiving artifacts