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[Espressomd-maintainer] Build failed in Jenkins: master-multiconfig-comp


From: Jenkins Demon
Subject: [Espressomd-maintainer] Build failed in Jenkins: master-multiconfig-compile » lees-edwards #112
Date: Fri, 18 Nov 2016 10:01:10 +0100 (CET)

See 
<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/112/changes>

Changes:

[Tilak Waelde] changed jenkins cmake script

------------------------------------------
[...truncated 266 lines...]
****************************************************************
checking whether to build the Tcl interface... yes
checking for libtcl8.6... yes
checking for tcl.h... yes
checking whether to use Tk... yes
****************************************************************
*                          h5md                                *
****************************************************************
checking whether to build with h5md support... yes
checking for libhdf5... yes
checking for hdf5.h... yes
****************************************************************
*                   Other settings                             *
****************************************************************
checking whether to use efence... no
checking whether the variable MYCONFIG is set... no
checking the number of available CPUs... 8 
****************************************************************
*                   Creating output files                      *
****************************************************************
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config/Makefile
config.status: creating config/myconfig-sample-header.hpp
config.status: creating src/Makefile
config.status: creating src/core/Makefile
config.status: creating src/tcl/Makefile
config.status: creating src/python/espressomd/Makefile
config.status: creating src/core/unit_tests/Makefile
config.status: creating tools/Makefile
config.status: creating scripts/Makefile
config.status: creating testsuite/Makefile
config.status: creating testsuite/tcl/Makefile
config.status: creating testsuite/python/Makefile
config.status: creating doc/Makefile
config.status: creating doc/logo/Makefile
config.status: creating doc/ug/Makefile
config.status: creating doc/dg/Makefile
config.status: creating doc/doxygen/Makefile
config.status: creating doc/tutorials/Makefile
config.status: creating doc/tutorials/tcl/Makefile
config.status: creating doc/tutorials/tcl/00-building_espresso/Makefile
config.status: creating doc/tutorials/tcl/01-lennard_jones/Makefile
config.status: creating doc/tutorials/tcl/02-charged_system/Makefile
config.status: creating doc/tutorials/tcl/03-object_in_fluid/Makefile
config.status: creating doc/tutorials/tcl/04-lattice_boltzmann/Makefile
config.status: creating doc/tutorials/tcl/05-raspberry_electrophoresis/Makefile
config.status: creating doc/tutorials/tcl/06-active_matter/Makefile
config.status: creating doc/tutorials/tcl/07-electrokinetics/Makefile
config.status: creating doc/tutorials/tcl/08-visualization/Makefile
config.status: creating doc/tutorials/tcl/09-catalytic_reactions/Makefile
config.status: creating doc/latexit.sh
config.status: creating testsuite/tcl/runtest.sh
config.status: creating testsuite/python/runtest.sh
config.status: creating tools/es_mpiexec
config.status: creating src/python/pypresso
config.status: creating src/acconfig.hpp
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing myconfig-sample.hpp commands
configure: WARNING: unrecognized options: --with-mpi
****************************************************************
*                   Configuration summary                      *
****************************************************************
platform detected       = x86_64-suse-linux-gnu
package version         = 3.4-dev-2950-g2a10747
development sources     = yes

Compiler
--------
compiler                = mpic++
linker                  = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64
c++ compiler flags      =  -std=c++11
c++ preprocessor flags  =  -I/usr/local/cuda/include
linker flags            =  -L/usr/local/cuda/lib64
libraries               = -lhdf5 -ltcl8.6 -lcurand -lcublas -lcufft -lcudart 
-lfftw3  -lm -ldl -lboost_mpi-mt
using debug flags       = 
using profiling flags   = 

cython complier         = 
cython preproc flags    = 


Libraries
---------
FFTW                    = yes
efence                  = no
h5md                    = yes
boost_test              = 

Cuda
----
CUDA compiler           = /usr/local/cuda/bin/nvcc
CUDA flags              =  -O3 -std c++11 --ptxas-options=-v -gencode 
arch=compute_20,code=compute_20

Tcl/Tk
------
Tcl version             = tcl8.6
Tk version              = none

Python
------
python                  = /usr/bin/python -B
build python interface  = 

Other settings
--------------
config                  = myconfig.hpp
installation prefix     = /home/jenkins/Espresso
number of test tasks    = 8
mympiexec               = 
mpiexec                 = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec
pdflatex                = /group/icp/texlive/bin/x86_64-linux/pdflatex
makeindex               = /group/icp/texlive/bin/x86_64-linux/makeindex
bibtex                  = /group/icp/texlive/bin/x86_64-linux/bibtex
doxygen                 = /usr/bin/doxygen
dot                     = /usr/bin/dot

Not building Python interface.
****************************************************************
* DEPRECATION WARNING: The autoconf/autotools build system     *
* will be replaced by cmake in the future.                     *
* New features are only available via cmake.                   *
****************************************************************
END CONFIGURE
<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/>
+ maintainer/jenkins/build.sh
23208 (process ID) old priority 0, new priority 5
  
srcdir=<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/>
  
builddir=<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/>
  insource=true
START BUILD
  myconfig=lees-edwards
  build_procs=4
<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/>
 
<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/>
Copying lees-edwards.hpp to 
<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/myconfig.hpp...>
>make -j 4 
Making all in config
make[1]: Entering directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/config'>
make[1]: Nothing to be done for 'all'.
make[1]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/config'>
Making all in src
make[1]: Entering directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/src'>
make  all-recursive
make[2]: Entering directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/src'>
Making all in core
make[3]: Entering directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/src/core'>
  GEN      config-features.cpp
  GEN      config-features.hpp
  GEN      myconfig-final.hpp <= ../../myconfig.hpp
make  all-recursive
make[4]: Entering directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/src/core'>
make[5]: Entering directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/src/core'>
  CXX      config-features.lo
  CXX      cells.lo
  CXX      collision.lo
  CXX      communication.lo
In file included from cells.cpp:32:0:
grid.hpp: In function 'void fold_coordinate(double*, double*, int*, int)':
grid.hpp:229:24: error: 'lees_edwards_offset' was not declared in this scope
       pos[0]       -= (lees_edwards_offset * img_count); 
                        ^
grid.hpp:230:24: error: 'lees_edwards_rate' was not declared in this scope
       vel[0]       -= (lees_edwards_rate   * img_count);       
                        ^
grid.hpp: In function 'void unfold_position(double*, double*, int*)':
grid.hpp:302:49: error: 'lees_edwards_offset' was not declared in this scope
   pos[0] += image_box[0]*box_l[0] + y_img_count*lees_edwards_offset;
                                                 ^
grid.hpp:306:27: error: 'lees_edwards_rate' was not declared in this scope
   vel[0] += y_img_count * lees_edwards_rate;
                           ^
In file included from domain_decomposition.hpp:62:0,
                 from cells.cpp:40:
thermostat.hpp: In function 'double le_frameV(int, double*, double*)':
thermostat.hpp:150:32: error: 'lees_edwards_rate' was not declared in this scope
        return( vel[0] - relY * lees_edwards_rate );
                                ^
In file included from collision.cpp:24:0:
grid.hpp: In function 'void fold_coordinate(double*, double*, int*, int)':
grid.hpp:229:24: error: 'lees_edwards_offset' was not declared in this scope
       pos[0]       -= (lees_edwards_offset * img_count); 
                        ^
grid.hpp:230:24: error: 'lees_edwards_rate' was not declared in this scope
       vel[0]       -= (lees_edwards_rate   * img_count);       
                        ^
grid.hpp: In function 'void unfold_position(double*, double*, int*)':
grid.hpp:302:49: error: 'lees_edwards_offset' was not declared in this scope
   pos[0] += image_box[0]*box_l[0] + y_img_count*lees_edwards_offset;
                                                 ^
grid.hpp:306:27: error: 'lees_edwards_rate' was not declared in this scope
   vel[0] += y_img_count * lees_edwards_rate;
                           ^
In file included from domain_decomposition.hpp:62:0,
                 from collision.cpp:25:
thermostat.hpp: In function 'double le_frameV(int, double*, double*)':
thermostat.hpp:150:32: error: 'lees_edwards_rate' was not declared in this scope
        return( vel[0] - relY * lees_edwards_rate );
                                ^
Makefile:1019: recipe for target 'collision.lo' failed
make[5]: *** [collision.lo] Error 1
make[5]: *** Waiting for unfinished jobs....
Makefile:1019: recipe for target 'cells.lo' failed
make[5]: *** [cells.lo] Error 1
In file included from statistics.hpp:29:0,
                 from energy.hpp:39,
                 from communication.cpp:45:
grid.hpp: In function 'void fold_coordinate(double*, double*, int*, int)':
grid.hpp:229:24: error: 'lees_edwards_offset' was not declared in this scope
       pos[0]       -= (lees_edwards_offset * img_count); 
                        ^
grid.hpp:230:24: error: 'lees_edwards_rate' was not declared in this scope
       vel[0]       -= (lees_edwards_rate   * img_count);       
                        ^
grid.hpp: In function 'void unfold_position(double*, double*, int*)':
grid.hpp:302:49: error: 'lees_edwards_offset' was not declared in this scope
   pos[0] += image_box[0]*box_l[0] + y_img_count*lees_edwards_offset;
                                                 ^
grid.hpp:306:27: error: 'lees_edwards_rate' was not declared in this scope
   vel[0] += y_img_count * lees_edwards_rate;
                           ^
In file included from domain_decomposition.hpp:62:0,
                 from iccp3m.hpp:61,
                 from forces.hpp:31,
                 from communication.cpp:47:
thermostat.hpp: In function 'double le_frameV(int, double*, double*)':
thermostat.hpp:150:32: error: 'lees_edwards_rate' was not declared in this scope
        return( vel[0] - relY * lees_edwards_rate );
                                ^
Makefile:1019: recipe for target 'communication.lo' failed
make[5]: *** [communication.lo] Error 1
make[5]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/src/core'>
Makefile:1042: recipe for target 'all-recursive' failed
make[4]: *** [all-recursive] Error 1
make[4]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/src/core'>
Makefile:711: recipe for target 'all' failed
make[3]: *** [all] Error 2
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/src/core'>
Makefile:455: recipe for target 'all-recursive' failed
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/src'>
Makefile:393: recipe for target 'all' failed
make[1]: *** [all] Error 2
make[1]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=lees-edwards/ws/src'>
Makefile:481: recipe for target 'all-recursive' failed
make: *** [all-recursive] Error 1
+ exit 1
Build step 'Execute shell' marked build as failure



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