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[Espressomd-maintainer] Build failed in Jenkins: master-build-core #5
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From: |
Jenkins Demon |
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Subject: |
[Espressomd-maintainer] Build failed in Jenkins: master-build-core #5 |
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Date: |
Tue, 31 Jan 2017 13:23:33 +0100 (CET) |
See <http://espressomd.org/jenkins/job/master-build-core/5/changes>
Changes:
[michael.lahnert] potential bugfix for bounce back in CPU lb
[michael.lahnert] adapt test-cases and fix unit conversion
[michael.lahnert] remove clutter
------------------------------------------
[...truncated 20.62 KB...]
[ 64%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/mdlc_correction.cpp.o
[ 64%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/lees_edwards.cpp.o
[ 65%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/layered.cpp.o
[ 65%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/RuntimeErrorStream.cpp.o
[ 67%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/utils.cpp.o
[ 67%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/readpdb.cpp.o
[ 68%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/statistics_molecule.cpp.o
[ 68%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/vmdsock.cpp.o
[ 69%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/RuntimeErrorCollector.cpp.o
[ 69%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/debye_hueckel.cpp.o
[ 70%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/forcecap.cpp.o
[ 70%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/hydrogen_bond.cpp.o
[ 70%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/lb-boundaries.cpp.o
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[ 71%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/cuda_init.cpp.o
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src/core/CMakeFiles/EspressoCore.dir/endangledist.cpp.o
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src/core/CMakeFiles/EspressoCore.dir/soft_sphere.cpp.o
[ 74%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/ghmc.cpp.o
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src/core/CMakeFiles/EspressoCore.dir/integrate_sd.cpp.o
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src/core/CMakeFiles/EspressoCore.dir/statistics_wallstuff.cpp.o
[ 76%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/angledist.cpp.o
[ 76%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/gb.cpp.o
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[ 77%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/constraint.cpp.o
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src/core/CMakeFiles/EspressoCore.dir/interaction_data.cpp.o
[ 78%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/mmm1d.cpp.o
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src/core/CMakeFiles/EspressoCore.dir/cuda_interface.cpp.o
[ 84%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/mmm2d.cpp.o
[ 84%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/bonded_coulomb.cpp.o
[ 85%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/dpd.cpp.o
[ 85%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/iccp3m.cpp.o
[ 87%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/elc.cpp.o
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[ 88%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/overlap.cpp.o
[ 88%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/lj.cpp.o
[ 89%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/hat.cpp.o
[ 89%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/p3m_gpu.cpp.o
[ 89%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/collision.cpp.o
[ 90%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/electrokinetics_pdb_parse.cpp.o
[ 90%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/random.cpp.o
[ 91%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/Geometry.cpp.o
[ 91%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/twist_stack.cpp.o
[ 92%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/galilei.cpp.o
[ 92%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/umbrella.cpp.o
[ 94%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid.cpp.o
[ 94%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/virtual_sites.cpp.o
[ 95%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/steppot.cpp.o
[ 95%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/harmonic_dumbbell.cpp.o
[ 95%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/tuning.cpp.o
[ 96%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/statistics_observable.cpp.o
[ 96%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/Vector.cpp.o
[ 97%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/mol_cut.cpp.o
[ 97%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/polymer.cpp.o
[ 98%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/config-features.cpp.o
[ 98%] Building CXX object
src/core/CMakeFiles/EspressoCore.dir/config-version.cpp.o
[100%] Linking CXX shared library libEspressoCore.so
[100%] Built target EspressoCore
==================================================
END BUILD
==================================================
==================================================
START TEST
==================================================
-- Config file:
<http://espressomd.org/jenkins/job/master-build-core/ws/build/myconfig.hpp>
-- checking for module 'scafacos'
-- package 'scafacos' not found
-- Boost version: 1.54.0
-- Found the following Boost libraries:
-- mpi
-- serialization
-- Boost version: 1.54.0
-- Found the following Boost libraries:
-- unit_test_framework
-- writing
<http://espressomd.org/jenkins/job/master-build-core/ws/build/myconfig-sample.hpp>
--
-- The following OPTIONAL packages have been found:
* PythonInterp
* FFTW3
* HDF5
* PkgConfig
* Doxygen
-- The following REQUIRED packages have been found:
* Threads
* Boost
* MPI
-- Configuring done
CMake Warning at src/core/CMakeLists.txt:25 (add_library):
Cannot generate a safe runtime search path for target EspressoCore because
files in some directories may conflict with libraries in implicit
directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
CMake Warning at src/core/unit_tests/CMakeLists.txt:31 (add_executable):
Cannot generate a safe runtime search path for target MpiCallbacks_test
because files in some directories may conflict with libraries in implicit
directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
Call Stack (most recent call first):
src/core/unit_tests/CMakeLists.txt:51 (unit_test)
CMake Warning at src/core/unit_tests/CMakeLists.txt:31 (add_executable):
Cannot generate a safe runtime search path for target
NumeratedContainer_test because files in some directories may conflict with
libraries in implicit directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
Call Stack (most recent call first):
src/core/unit_tests/CMakeLists.txt:48 (unit_test)
CMake Warning at src/core/unit_tests/CMakeLists.txt:31 (add_executable):
Cannot generate a safe runtime search path for target RunningAverage_test
because files in some directories may conflict with libraries in implicit
directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
Call Stack (most recent call first):
src/core/unit_tests/CMakeLists.txt:43 (unit_test)
CMake Warning at src/core/unit_tests/CMakeLists.txt:31 (add_executable):
Cannot generate a safe runtime search path for target
RuntimeErrorCollector_test because files in some directories may conflict
with libraries in implicit directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
Call Stack (most recent call first):
src/core/unit_tests/CMakeLists.txt:46 (unit_test)
CMake Warning at src/core/unit_tests/CMakeLists.txt:31 (add_executable):
Cannot generate a safe runtime search path for target RuntimeError_test
because files in some directories may conflict with libraries in implicit
directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
Call Stack (most recent call first):
src/core/unit_tests/CMakeLists.txt:42 (unit_test)
CMake Warning at src/core/unit_tests/CMakeLists.txt:31 (add_executable):
Cannot generate a safe runtime search path for target Vector_test because
files in some directories may conflict with libraries in implicit
directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
Call Stack (most recent call first):
src/core/unit_tests/CMakeLists.txt:41 (unit_test)
-- Generating done
-- Build files have been written to:
<http://espressomd.org/jenkins/job/master-build-core/ws/build>
[ 0%] Built target myconfig
[ 14%] Built target EspressoConfig
Scanning dependencies of target MpiCallbacks_test
[ 14%] Building CXX object
src/core/unit_tests/CMakeFiles/MpiCallbacks_test.dir/MpiCallbacks_test.cpp.o
[ 28%] Building CXX object
src/core/unit_tests/CMakeFiles/MpiCallbacks_test.dir/__/MpiCallbacks.cpp.o
[ 28%] Linking CXX executable MpiCallbacks_test
[ 28%] Built target MpiCallbacks_test
Scanning dependencies of target Vector_test
[ 42%] Building CXX object
src/core/unit_tests/CMakeFiles/Vector_test.dir/Vector_test.cpp.o
[ 42%] Linking CXX executable Vector_test
[ 42%] Built target Vector_test
Scanning dependencies of target RuntimeError_test
[ 42%] Building CXX object
src/core/unit_tests/CMakeFiles/RuntimeError_test.dir/RuntimeError_test.cpp.o
[ 42%] Linking CXX executable RuntimeError_test
[ 42%] Built target RuntimeError_test
Scanning dependencies of target RunningAverage_test
[ 42%] Building CXX object
src/core/unit_tests/CMakeFiles/RunningAverage_test.dir/RunningAverage_test.cpp.o
[ 57%] Linking CXX executable RunningAverage_test
[ 57%] Built target RunningAverage_test
Scanning dependencies of target RuntimeErrorCollector_test
[ 57%] Building CXX object
src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/RuntimeErrorCollector_test.cpp.o
[ 71%] Building CXX object
src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/__/RuntimeErrorCollector.cpp.o
[ 71%] Building CXX object
src/core/unit_tests/CMakeFiles/RuntimeErrorCollector_test.dir/__/RuntimeError.cpp.o
[ 85%] Linking CXX executable RuntimeErrorCollector_test
[ 85%] Built target RuntimeErrorCollector_test
Scanning dependencies of target NumeratedContainer_test
[100%] Building CXX object
src/core/unit_tests/CMakeFiles/NumeratedContainer_test.dir/NumeratedContainer_test.cpp.o
[100%] Linking CXX executable NumeratedContainer_test
[100%] Built target NumeratedContainer_test
Scanning dependencies of target check_unit_tests
Test project
<http://espressomd.org/jenkins/job/master-build-core/ws/build/src/core/unit_tests>
Start 1: Vector_test
1/6 Test #1: Vector_test ...................... Passed 0.02 sec
Start 2: RuntimeError_test
2/6 Test #2: RuntimeError_test ................ Passed 0.01 sec
Start 3: RunningAverage_test
3/6 Test #3: RunningAverage_test .............. Passed 0.01 sec
Start 4: RuntimeErrorCollector_test
4/6 Test #4: RuntimeErrorCollector_test ....... Passed 0.13 sec
Start 5: NumeratedContainer_test
5/6 Test #5: NumeratedContainer_test .......... Passed 0.01 sec
Start 6: MpiCallbacks_test
6/6 Test #6: MpiCallbacks_test ................ Passed 0.12 sec
100% tests passed, 0 tests failed out of 6
Total Test time (real) = 0.29 sec
[100%] Built target check_unit_tests
Scanning dependencies of target check
[100%] Built target check
make check returned 0
==================================================
END TEST
==================================================
Archiving artifacts
ERROR: No artifacts found that match the file pattern
"config.log,testsuite/runtest.log". Configuration error?
ERROR: ‘config.log’ doesn’t match anything
Build step 'Archive the artifacts' changed build result to FAILURE