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[Espressomd-maintainer] Build failed in Jenkins: master-build-tcl #6
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From: |
Jenkins Demon |
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Subject: |
[Espressomd-maintainer] Build failed in Jenkins: master-build-tcl #6 |
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Date: |
Tue, 31 Jan 2017 15:17:30 +0100 (CET) |
See <http://espressomd.org/jenkins/job/master-build-tcl/6/changes>
Changes:
[sschoell] add particle mass to cuda interface
[sschoell] remove total momentum (debug)
[sschoell] remove total momentum
[sschoell] bugfix
------------------------------------------
[...truncated 1.18 KB...]
cmake_params=
with_fftw=true
with_tcl=true
with_python_interface=false
myconfig=maxset
check_procs=2
make_check=true
make_params=
Indentation in Python files correct...
Creating <http://espressomd.org/jenkins/job/master-build-tcl/ws/build...>
==================================================
START CMAKE
==================================================
Copying maxset.hpp to
<http://espressomd.org/jenkins/job/master-build-tcl/ws/build/myconfig.hpp...>
>cmake -DWITH_PYTHON=OFF -DWITH_TCL=ON
><http://espressomd.org/jenkins/job/master-build-tcl/ws/>
-- The C compiler identification is GNU 4.8.5
-- The CXX compiler identification is GNU 4.8.5
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Config file:
<http://espressomd.org/jenkins/job/master-build-tcl/ws/build/myconfig.hpp>
-- Performing Test result__PRETTY_FUNCTION__
-- Performing Test result__PRETTY_FUNCTION__ - Success
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Found PythonInterp: /usr/bin/python (found version "2.7.12")
-- Found FFTW3: /usr/lib64/libfftw3.so
-- Found Tclsh: /usr/bin/tclsh (found version "8.6")
-- Found TCL: /usr/lib64/libtcl8.6.so
-- Found TCLTK: /usr/lib64/libtcl8.6.so
-- Found TK: /usr/lib64/libtk8.6.so
-- Found HDF5:
/usr/lib64/libhdf5.so;/usr/lib64/libpthread.so;/usr/lib64/libz.so;/usr/lib64/libdl.so;/usr/lib64/libm.so
(found version "1.8.15")
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.28")
-- checking for module 'scafacos'
-- package 'scafacos' not found
-- Boost version: 1.54.0
-- Found the following Boost libraries:
-- mpi
-- serialization
-- Boost version: 1.54.0
-- Found the following Boost libraries:
-- unit_test_framework
-- Found MPI_C: /usr/lib64/mpi/gcc/openmpi/lib64/libmpi.so
-- Found MPI_CXX:
/usr/lib64/mpi/gcc/openmpi/lib64/libmpi_cxx.so;/usr/lib64/mpi/gcc/openmpi/lib64/libmpi.so
-- Found Doxygen: /usr/bin/doxygen (found version "1.8.6")
-- writing
<http://espressomd.org/jenkins/job/master-build-tcl/ws/build/myconfig-sample.hpp>
--
-- The following OPTIONAL packages have been found:
* PythonInterp
* FFTW3
* TCL
* HDF5
* PkgConfig
* Doxygen
-- The following REQUIRED packages have been found:
* Threads
* Boost
* MPI
-- Configuring done
CMake Warning at src/core/CMakeLists.txt:25 (add_library):
Cannot generate a safe runtime search path for target EspressoCore because
files in some directories may conflict with libraries in implicit
directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
CMake Warning at src/core/unit_tests/CMakeLists.txt:31 (add_executable):
Cannot generate a safe runtime search path for target MpiCallbacks_test
because files in some directories may conflict with libraries in implicit
directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
Call Stack (most recent call first):
src/core/unit_tests/CMakeLists.txt:51 (unit_test)
CMake Warning at src/core/unit_tests/CMakeLists.txt:31 (add_executable):
Cannot generate a safe runtime search path for target
NumeratedContainer_test because files in some directories may conflict with
libraries in implicit directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
Call Stack (most recent call first):
src/core/unit_tests/CMakeLists.txt:48 (unit_test)
CMake Warning at src/core/unit_tests/CMakeLists.txt:31 (add_executable):
Cannot generate a safe runtime search path for target RunningAverage_test
because files in some directories may conflict with libraries in implicit
directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
Call Stack (most recent call first):
src/core/unit_tests/CMakeLists.txt:43 (unit_test)
CMake Warning at src/core/unit_tests/CMakeLists.txt:31 (add_executable):
Cannot generate a safe runtime search path for target
RuntimeErrorCollector_test because files in some directories may conflict
with libraries in implicit directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
Call Stack (most recent call first):
src/core/unit_tests/CMakeLists.txt:46 (unit_test)
CMake Warning at src/core/unit_tests/CMakeLists.txt:31 (add_executable):
Cannot generate a safe runtime search path for target RuntimeError_test
because files in some directories may conflict with libraries in implicit
directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
Call Stack (most recent call first):
src/core/unit_tests/CMakeLists.txt:42 (unit_test)
CMake Warning at src/core/unit_tests/CMakeLists.txt:31 (add_executable):
Cannot generate a safe runtime search path for target Vector_test because
files in some directories may conflict with libraries in implicit
directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
Call Stack (most recent call first):
src/core/unit_tests/CMakeLists.txt:41 (unit_test)
CMake Warning at src/tcl/CMakeLists.txt:23 (add_executable):
Cannot generate a safe runtime search path for target Espresso because
files in some directories may conflict with libraries in implicit
directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
CMake Warning at src/tcl/CMakeLists.txt:31 (add_executable):
Cannot generate a safe runtime search path for target Espresso_install
because files in some directories may conflict with libraries in implicit
directories:
runtime library [libhdf5.so.10] in /usr/lib64 may be hidden by files in:
/usr/lib64/mpi/gcc/openmpi/lib64
Some of these libraries may not be found correctly.
-- Generating done
-- Build files have been written to:
<http://espressomd.org/jenkins/job/master-build-tcl/ws/build>
==================================================
END CMAKE
==================================================
==================================================
START BUILD
==================================================
>make
Scanning dependencies of target myconfig
[ 0%] Built target myconfig
Scanning dependencies of target EspressoConfig
[ 1%] Generating config-features.hpp, config-features.cpp
Reading definitions from
<http://espressomd.org/jenkins/job/master-build-tcl/ws/src/features.def...>
Done.
Writing
<http://espressomd.org/jenkins/job/master-build-tcl/ws/build/src/core/config-features.hpp...>
Done.
Writing
<http://espressomd.org/jenkins/job/master-build-tcl/ws/build/src/core/config-features.cpp...>
Done.
[ 1%] Built target EspressoConfig
Scanning dependencies of target ObjectInFluid
[ 1%] Building CXX object
src/core/object-in-fluid/CMakeFiles/ObjectInFluid.dir/oif_local_forces.cpp.o
[ 1%] Building CXX object
src/core/object-in-fluid/CMakeFiles/ObjectInFluid.dir/membrane_collision.cpp.o
[ 1%] Building CXX object
src/core/object-in-fluid/CMakeFiles/ObjectInFluid.dir/out_direction.cpp.o
[ 2%] Building CXX object
src/core/object-in-fluid/CMakeFiles/ObjectInFluid.dir/affinity.cpp.o
[ 2%] Building CXX object
src/core/object-in-fluid/CMakeFiles/ObjectInFluid.dir/oif_global_forces.cpp.o
[ 2%] Linking CXX shared library libObjectInFluid.so
[ 2%] Built target ObjectInFluid
[ 3%] Building NVCC (Device) object
src/core/CMakeFiles/EspressoCuda.dir/EspressoCuda_generated_integrate_sd_cuda_debug.cu.o
[ 3%] Building NVCC (Device) object
src/core/CMakeFiles/EspressoCuda.dir/EspressoCuda_generated_p3m_gpu_cuda.cu.o
[ 3%] Building NVCC (Device) object
src/core/CMakeFiles/EspressoCuda.dir/EspressoCuda_generated_integrate_sd_matrix.cu.o
[ 4%] Building NVCC (Device) object
src/core/CMakeFiles/EspressoCuda.dir/EspressoCuda_generated_integrate_sd_cuda_device.cu.o
[ 4%] Building NVCC (Device) object
src/core/CMakeFiles/EspressoCuda.dir/EspressoCuda_generated_cuda_init_cuda.cu.o
[ 4%] Building NVCC (Device) object
src/core/CMakeFiles/EspressoCuda.dir/EspressoCuda_generated_integrate_sd_cuda.cu.o
[ 5%] Building NVCC (Device) object
src/core/CMakeFiles/EspressoCuda.dir/EspressoCuda_generated_integrate_sd_cuda_kernel.cu.o
[ 5%] Building NVCC (Device) object
src/core/CMakeFiles/EspressoCuda.dir/EspressoCuda_generated_lbgpu_cuda.cu.o
[ 5%] Building NVCC (Device) object
src/core/CMakeFiles/EspressoCuda.dir/EspressoCuda_generated_fd-electrostatics_cuda.cu.o
[ 6%] Building NVCC (Device) object
src/core/CMakeFiles/EspressoCuda.dir/EspressoCuda_generated_EspressoSystemInterface_cuda.cu.o
[ 6%] Building NVCC (Device) object
src/core/CMakeFiles/EspressoCuda.dir/EspressoCuda_generated_cuda_common_cuda.cu.o
[ 6%] Building NVCC (Device) object
src/core/CMakeFiles/EspressoCuda.dir/EspressoCuda_generated_electrokinetics_cuda.cu.o
<http://espressomd.org/jenkins/job/master-build-tcl/ws/src/core/electrokinetics_cuda.cu(3913)>:
error: argument of type "ekfloat *" is incompatible with parameter of type
"double *"
1 error detected in the compilation of
"/tmp/tmpxft_000016dd_00000000-13_electrokinetics_cuda.compute_50.cpp1.ii".
CMake Error at EspressoCuda_generated_electrokinetics_cuda.cu.o.cmake:262
(message):
Error generating file
<http://espressomd.org/jenkins/job/master-build-tcl/ws/build/src/core/CMakeFiles/EspressoCuda.dir//./EspressoCuda_generated_electrokinetics_cuda.cu.o>
src/core/CMakeFiles/EspressoCuda.dir/build.make:133: recipe for target
'src/core/CMakeFiles/EspressoCuda.dir/EspressoCuda_generated_electrokinetics_cuda.cu.o'
failed
make[2]: ***
[src/core/CMakeFiles/EspressoCuda.dir/EspressoCuda_generated_electrokinetics_cuda.cu.o]
Error 1
CMakeFiles/Makefile2:1573: recipe for target
'src/core/CMakeFiles/EspressoCuda.dir/all' failed
make[1]: *** [src/core/CMakeFiles/EspressoCuda.dir/all] Error 2
Makefile:138: recipe for target 'all' failed
make: *** [all] Error 2
+ exit 1
Build step 'Execute shell' marked build as failure
Archiving artifacts