If you are trying to debug something like: ImportError: No module named ntp you have come to the right place. The default location where we install our python libraries is /usr/local/lib/pythonX.Y/site-packages/ where X and Y are the python version numbers. Unfortunately, that's not on the default search path of several OSes/distros, in particular Fedora and NetBSD. Python has a search path that is used to find library modules when you import them. You can see your search path with: python2 -c "import sys; print sys.path" or python3 -c "import sys; print(sys.path)" Info on Python's search path: https://docs.python.org/2/tutorial/modules.html or https://docs.python.org/3/tutorial/modules.html There are several ways to make things work. 1: You can modify the location where waf will install the libraries. For NetBSD, something like this should work: ./waf configure \ --pythondir=/usr/pkg/lib/python2.7/site-packages \ --pythonarchdir=/usr/pkg/lib/python2.7/site-packages \ ... You need to specify it at configure time. Install time is too late. 2: You can setup your PYTHONPATH with something like this: export PYTHONPATH=/usr/local/lib/python2.7/site-packages For bash, you can add that line to your .bashrc or the system /etc/bashrc If you don't put it in the system file, all users will have to do this, including root if root uses any ntp scripts. 3: You can add to the default search path by setting up a .pth file with something like this: echo /usr/local/lib/python2.7/site-packages > \ /usr/lib/python2.7/site-packages/ntpsec.pth This works for all users, including root. Note that the pth file must be on the default Python search path.