[Gsrc-commit] trunk r3882: update pagan-msa to 20150723

[Carl Hansen]

------------------------------------------------------------
revno: 3882
revision-id: address@hidden
parent: address@hidden
committer: Carl Hansen <address@hidden>
branch nick: trunk
timestamp: Fri 2016-09-23 18:28:54 -0700
message:
  update pagan-msa to 20150723
modified:
  pkg/bio/pagan-msa/Makefile     makefile-20160617195624-kwz1a09vkg4le6fu-146
  pkg/bio/pagan-msa/sha256sums   sha256sums-20160617195624-kwz1a09vkg4le6fu-148

=== modified file 'pkg/bio/pagan-msa/Makefile'
--- a/pkg/bio/pagan-msa/Makefile        2016-06-17 19:57:40 +0000
+++ b/pkg/bio/pagan-msa/Makefile        2016-09-24 01:28:54 +0000
@@ -17,8 +17,9 @@
 
 NAME = PAGAN
 GARNAME = pagan-msa
-GARVERSION = 20121025
-HOME_URL = https://code.google.com/p/pagan-msa/
+GARVERSION = 20150723
+#HOME_URL = https://code.google.com/p/pagan-msa/
+HOME_URL = http://wasabiapp.org/software/pagan  
 DESCRIPTION = A general-purpose method for the alignment of sequence graphs
 define BLURB
 PAGAN is a general-purpose method for the alignment of sequence
@@ -28,13 +29,12 @@
 endef
 LICENSE = GPLv2 or later
 CITE = doi:10.1093/bioinformatics/bts198
-
 ######################################################################
 
-MASTER_SITES = http://$(GARNAME).googlecode.com/
-MASTER_SUBDIR = files/
+MASTER_SITES = http://wasabiapp.org/
+MASTER_SUBDIR = download/pagan/
 DISTFILES = pagan.src.$(GARVERSION).tgz
-PATCHFILES = $(DISTNAME)-include-unistd_h.patch
+#PATCHFILES = $(DISTNAME)-include-unistd_h.patch
 WORKSRC = $(WORKDIR)/$(GARNAME)/src
 BUILD_SCRIPTS = $(WORKSRC)/Makefile
 INSTALL_SCRIPTS = program

=== modified file 'pkg/bio/pagan-msa/sha256sums'
--- a/pkg/bio/pagan-msa/sha256sums      2016-06-17 19:57:40 +0000
+++ b/pkg/bio/pagan-msa/sha256sums      2016-09-24 01:28:54 +0000
@@ -1,2 +1,1 @@
-5443c2ad832ab5dbd54a15aee2660ace8a24632d16b21b12ca2917c6503feec4  
download/pagan.src.20121025.tgz
-93a9b0895d11271d71afdbf82bf09c123134c7d914147f38e4af317bb778dcfa  
download/pagan-msa-20121025-include-unistd_h.patch
+68de97558f3bb4a932b70ba097f851ce1680a59902437ac49d73d64af30fc83f  
download/pagan.src.20150723.tgz