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30/155: gnu: star: Update to 2.5.2b.
From: |
John Darrington |
Subject: |
30/155: gnu: star: Update to 2.5.2b. |
Date: |
Wed, 21 Dec 2016 20:48:31 +0000 (UTC) |
jmd pushed a commit to branch wip-installer
in repository guix.
commit 946a7a3cca443c5ce53294729317ea4c12fee6ed
Author: Raoul Bonnal <address@hidden>
Date: Sat Dec 17 23:17:34 2016 +1000
gnu: star: Update to 2.5.2b.
* gnu/packages/bioinformatics (star): Update to 2.5.2b.
[source]: Delete precompiled binary.
Co-authored-by: Ben Woodcroft <address@hidden>
---
gnu/packages/bioinformatics.scm | 5 +++--
1 file changed, 3 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 3e9c82f..9ce4e3a 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4924,7 +4924,7 @@ application of SortMeRNA is filtering rRNA from
metatranscriptomic data.")
(define-public star
(package
(name "star")
- (version "2.5.2a")
+ (version "2.5.2b")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/alexdobin/STAR/archive/"
@@ -4932,7 +4932,7 @@ application of SortMeRNA is filtering rRNA from
metatranscriptomic data.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "0xjlsm4p9flln111hv4xx7xy94c2nl53zvdvbk9winmiradjsdra"))
+ "1na6np880r1zaamiy00hy8bid5anpy0kgf63587v2yl080krk2zq"))
(modules '((guix build utils)))
(snippet
'(begin
@@ -4941,6 +4941,7 @@ application of SortMeRNA is filtering rRNA from
metatranscriptomic data.")
;; Remove pre-built binaries and bundled htslib sources.
(delete-file-recursively "bin/MacOSX_x86_64")
(delete-file-recursively "bin/Linux_x86_64")
+ (delete-file-recursively "bin/Linux_x86_64_static")
(delete-file-recursively "source/htslib")
#t))))
(build-system gnu-build-system)
- 15/155: doc: "Nar" now means "normalized archive"., (continued)
- 15/155: doc: "Nar" now means "normalized archive"., John Darrington, 2016/12/21
- 14/155: Revert "gnu: kmod: Update to 23.", John Darrington, 2016/12/21
- 22/155: gnu: Add Greek Aspell dictionary, John Darrington, 2016/12/21
- 12/155: installer: Add gurses modules., John Darrington, 2016/12/21
- 35/155: import cran: Translate MIT to the Expat license., John Darrington, 2016/12/21
- 27/155: gnu: Add emacs-bui., John Darrington, 2016/12/21
- 47/155: gnu: sane-backends: Disable backend generation., John Darrington, 2016/12/21
- 17/155: gnu: tor: Recommend torsocks., John Darrington, 2016/12/21
- 10/155: installer: Perform a task's dependencies prior to the task itself., John Darrington, 2016/12/21
- 28/155: gnu: Add emacs-guix., John Darrington, 2016/12/21
- 30/155: gnu: star: Update to 2.5.2b.,
John Darrington <=
- 46/155: gnu: pinentry: Update to 1.0.0., John Darrington, 2016/12/21
- 52/155: gnu: r: Update to 3.3.2., John Darrington, 2016/12/21
- 44/155: import cran: Handle HTTP errors., John Darrington, 2016/12/21
- 26/155: gnu: imagemagick: Update to 6.9.6-8., John Darrington, 2016/12/21
- 40/155: import cran: Ignore default R packages., John Darrington, 2016/12/21
- 50/155: gnu: sane-backends: Remove timestamps from the output., John Darrington, 2016/12/21
- 39/155: import cran: description->package: Also return package dependencies., John Darrington, 2016/12/21
- 45/155: gnu: npth: Update to 1.3., John Darrington, 2016/12/21
- 42/155: import cran: Add "recursive" option., John Darrington, 2016/12/21
- 32/155: profiles: Remove dependency on 'glibc-utf8-locales' for tests., John Darrington, 2016/12/21