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07/89: gnu: r-bioccheck: Update to 1.14.0.
From: |
Ricardo Wurmus |
Subject: |
07/89: gnu: r-bioccheck: Update to 1.14.0. |
Date: |
Tue, 7 Nov 2017 02:44:47 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 7373b4167a657d0d21a3716145ca02fc23d74e3d
Author: Ricardo Wurmus <address@hidden>
Date: Mon Nov 6 18:49:13 2017 +0100
gnu: r-bioccheck: Update to 1.14.0.
* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.14.0.
[native-inputs]: Remove which.
[propagated-inputs]: Add r-stringdist.
---
gnu/packages/bioinformatics.scm | 9 ++++-----
1 file changed, 4 insertions(+), 5 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index f0f1c93..a3f15c6 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -6493,13 +6493,13 @@ functionality.")
(define-public r-bioccheck
(package
(name "r-bioccheck")
- (version "1.12.0")
+ (version "1.14.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "BiocCheck" version))
(sha256
(base32
- "01zkw5hggzvn0wj4msac71k1mknq4h2inn1c2hwqgw4cy1675wl0"))))
+ "1nzp8kgw13z9pgf885rplj6k37jcldfhbz0adqclxr2gq0yalmyx"))))
(properties
`((upstream-name . "BiocCheck")))
(build-system r-build-system)
@@ -6522,15 +6522,14 @@ functionality.")
(symlink (string-append script-dir "/BiocCheck")
(string-append dest-dir "/BiocCheck")))
#t)))))
- (native-inputs
- `(("which" ,which)))
(propagated-inputs
`(("r-codetools" ,r-codetools)
("r-graph" ,r-graph)
("r-httr" ,r-httr)
("r-optparse" ,r-optparse)
("r-biocinstaller" ,r-biocinstaller)
- ("r-biocviews" ,r-biocviews)))
+ ("r-biocviews" ,r-biocviews)
+ ("r-stringdist" ,r-stringdist)))
(home-page "https://bioconductor.org/packages/BiocCheck")
(synopsis "Executes Bioconductor-specific package checks")
(description "This package contains tools to perform additional quality
- branch master updated (89618fa -> 9ecc4c6), Ricardo Wurmus, 2017/11/07
- 01/89: import: utils: Add string helpers., Ricardo Wurmus, 2017/11/07
- 05/89: gnu: r-rgraphviz: Update to 2.22.0., Ricardo Wurmus, 2017/11/07
- 02/89: import: cran: Add support for Bioconductor 3.6., Ricardo Wurmus, 2017/11/07
- 09/89: gnu: r-dnacopy: Update to 1.52.0., Ricardo Wurmus, 2017/11/07
- 06/89: gnu: Add r-stringdist., Ricardo Wurmus, 2017/11/07
- 07/89: gnu: r-bioccheck: Update to 1.14.0.,
Ricardo Wurmus <=
- 08/89: gnu: r-biocviews: Update to 1.46.0., Ricardo Wurmus, 2017/11/07
- 12/89: gnu: r-genefilter: Update to 1.60.0., Ricardo Wurmus, 2017/11/07
- 17/89: gnu: r-rhtslib: Update to 1.10.0., Ricardo Wurmus, 2017/11/07
- 20/89: gnu: r-tximport: Update to 1.6.0., Ricardo Wurmus, 2017/11/07
- 23/89: gnu: r-copywriter: Update to 2.10.0., Ricardo Wurmus, 2017/11/07
- 25/89: gnu: r-sva: Update to 3.26.0., Ricardo Wurmus, 2017/11/07
- 04/89: guix: Add archive support for bioconductor-uri., Ricardo Wurmus, 2017/11/07
- 10/89: gnu: r-annotate: Update to 1.56.0., Ricardo Wurmus, 2017/11/07
- 14/89: gnu: r-dexseq: Update to 1.24.0., Ricardo Wurmus, 2017/11/07
- 15/89: gnu: r-annotationforge: Update to 1.20.0., Ricardo Wurmus, 2017/11/07