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78/89: gnu: r-rtracklayer: Update to 1.38.0.
From: |
Ricardo Wurmus |
Subject: |
78/89: gnu: r-rtracklayer: Update to 1.38.0. |
Date: |
Tue, 7 Nov 2017 02:45:02 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 4dd469ef6d49c3393cc85ac646bbaba48d1b86fa
Author: Ricardo Wurmus <address@hidden>
Date: Mon Nov 6 21:52:22 2017 +0100
gnu: r-rtracklayer: Update to 1.38.0.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.38.0.
[arguments]: Adjust patch to use system zlib.
---
gnu/packages/bioinformatics.scm | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index ee81058..e77ae72 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7158,13 +7158,13 @@ alignments.")
(define-public r-rtracklayer
(package
(name "r-rtracklayer")
- (version "1.36.4")
+ (version "1.38.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "rtracklayer" version))
(sha256
(base32
- "050q1rv04w31168ljr975vxva31n9lqdx84rnmsk6zcr6p640ffp"))))
+ "12al1ygzy9p4myxa1fd817m28x2fj6f863znk9bw3hp7knbi98dh"))))
(build-system r-build-system)
(arguments
`(#:phases
@@ -7172,7 +7172,7 @@ alignments.")
(add-after 'unpack 'use-system-zlib
(lambda _
(substitute* "DESCRIPTION"
- (("zlibbioc, ") ""))
+ ((" zlibbioc,") ""))
(substitute* "NAMESPACE"
(("import\\(zlibbioc\\)") ""))
#t)))))
- 65/89: gnu: r-motifrg: Update to 1.22.0., (continued)
- 65/89: gnu: r-motifrg: Update to 1.22.0., Ricardo Wurmus, 2017/11/07
- 85/89: gnu: r-annotationhub: Update to 2.10.0., Ricardo Wurmus, 2017/11/07
- 71/89: gnu: r-preprocesscore: Update to 1.40.0., Ricardo Wurmus, 2017/11/07
- 74/89: gnu: r-gostats: Update to 2.44.0., Ricardo Wurmus, 2017/11/07
- 75/89: gnu: r-edger: Update to 3.20.1., Ricardo Wurmus, 2017/11/07
- 39/89: gnu: r-genomicranges: Update to 1.30.0., Ricardo Wurmus, 2017/11/07
- 40/89: gnu: r-biobase: Update to 2.38.0., Ricardo Wurmus, 2017/11/07
- 37/89: gnu: r-limma: Update to 3.34.0., Ricardo Wurmus, 2017/11/07
- 60/89: gnu: r-msnid: Update to 1.11.0., Ricardo Wurmus, 2017/11/07
- 83/89: gnu: r-mzr: Update to 2.12.0., Ricardo Wurmus, 2017/11/07
- 78/89: gnu: r-rtracklayer: Update to 1.38.0.,
Ricardo Wurmus <=
- 89/89: gnu: r-servr: Update to 0.8., Ricardo Wurmus, 2017/11/07
- 87/89: gnu: r-msnbase: Update to 2.4.0., Ricardo Wurmus, 2017/11/07
- 86/89: gnu: r-mutationalpatterns: Update to 1.4.0., Ricardo Wurmus, 2017/11/07
- 88/89: gnu: r-tidyselect: Update to 0.2.3., Ricardo Wurmus, 2017/11/07
- 48/89: gnu: r-topgo: Update to 2.30.0., Ricardo Wurmus, 2017/11/07
- 68/89: gnu: r-rlang: Update to 0.1.4., Ricardo Wurmus, 2017/11/07
- 70/89: gnu: r-r-utils: Update to 2.6.0., Ricardo Wurmus, 2017/11/07
- 76/89: gnu: r-biomart: Update to 2.34.0., Ricardo Wurmus, 2017/11/07
- 72/89: gnu: r-lubridate: Update to 1.7.1., Ricardo Wurmus, 2017/11/07
- 67/89: gnu: r-vsn: Update to 3.46.0., Ricardo Wurmus, 2017/11/07