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04/112: gnu: r-diffbind: Update to 2.8.0.
From: |
Ricardo Wurmus |
Subject: |
04/112: gnu: r-diffbind: Update to 2.8.0. |
Date: |
Sat, 2 Jun 2018 07:39:57 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 45bbccf4e7393822a547cdabfcbd8d7b963e1e88
Author: Ricardo Wurmus <address@hidden>
Date: Sat Jun 2 11:40:51 2018 +0200
gnu: r-diffbind: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.8.0.
[propagated-inputs]: Add r-genomicranges, r-ggplot2, and
r-summarizedexperiment.
---
gnu/packages/bioconductor.scm | 7 +++++--
1 file changed, 5 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index d1e39bc..5baf390 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -110,14 +110,14 @@ region sets and other genomic features.")
(define-public r-diffbind
(package
(name "r-diffbind")
- (version "2.6.6")
+ (version "2.8.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "DiffBind" version))
(sha256
(base32
- "1sm5h6nq77hjfis6kr1nqyizcxgfz87dgpqc4fxlfqkmsd9n3vkp"))))
+ "1w1hybzd732ccg3q8zhirwfilq8sx3frv1x98zfyj3svzw98fish"))))
(properties `((upstream-name . "DiffBind")))
(build-system r-build-system)
(inputs
@@ -129,6 +129,8 @@ region sets and other genomic features.")
("r-dplyr" ,r-dplyr)
("r-edger" ,r-edger)
("r-genomicalignments" ,r-genomicalignments)
+ ("r-genomicranges" ,r-genomicranges)
+ ("r-ggplot2" ,r-ggplot2)
("r-ggrepel" ,r-ggrepel)
("r-gplots" ,r-gplots)
("r-iranges" ,r-iranges)
@@ -139,6 +141,7 @@ region sets and other genomic features.")
("r-rcpp" ,r-rcpp)
("r-rsamtools" ,r-rsamtools)
("r-s4vectors" ,r-s4vectors)
+ ("r-summarizedexperiment" ,r-summarizedexperiment)
("r-systempiper" ,r-systempiper)
("r-zlibbioc" ,r-zlibbioc)))
(home-page "http://bioconductor.org/packages/DiffBind")
- branch master updated (d5452aa -> 41f1755), Ricardo Wurmus, 2018/06/02
- 02/112: gnu: r-hpar: Update to 1.22.2., Ricardo Wurmus, 2018/06/02
- 01/112: gnu: r-minimal: Update to 3.5.0., Ricardo Wurmus, 2018/06/02
- 05/112: gnu: r-ripseeker: Update to 1.20.0., Ricardo Wurmus, 2018/06/02
- 04/112: gnu: r-diffbind: Update to 2.8.0.,
Ricardo Wurmus <=
- 07/112: gnu: r-marray: Update to 1.58.0., Ricardo Wurmus, 2018/06/02
- 08/112: gnu: r-cghbase: Update to 1.40.0., Ricardo Wurmus, 2018/06/02
- 06/112: gnu: r-chippeakanno: Update to 3.14.0., Ricardo Wurmus, 2018/06/02
- 11/112: gnu: r-annotate: Update to 1.58.0., Ricardo Wurmus, 2018/06/02
- 12/112: gnu: r-copynumber: Update to 1.20.0., Ricardo Wurmus, 2018/06/02
- 13/112: gnu: r-geneplotter: Update to 1.58.0., Ricardo Wurmus, 2018/06/02
- 15/112: gnu: r-deseq2: Update to 1.20.0., Ricardo Wurmus, 2018/06/02
- 20/112: gnu: r-category: Update to 2.46.0., Ricardo Wurmus, 2018/06/02
- 10/112: gnu: r-qdnaseq: Update to 1.16.0., Ricardo Wurmus, 2018/06/02
- 16/112: gnu: r-dexseq: Update to 1.26.0., Ricardo Wurmus, 2018/06/02