branch staging updated (b7a46ed -> 4dfea10)

[Marius Bakke]

mbakke pushed a change to branch staging
in repository guix.

      from  b7a46ed   gnu: openblas: Fix build on i686.
      adds  2b94c14   gnu: x265: Fix building on armhf-linux and aarch64-linux.
      adds  737d1b3   gnu: faba-icon-theme: Fix build.
      adds  9e1ede9   gnu: arc-icon-theme: Fix build.
      adds  3110c74   Revert "gnu: Remove Mr. Rescue."
      adds  8893218   gnu: mrrescue: Work on Löve 11.
      adds  ab5fc6a   gnu: libyaml: Update to 0.1.7.
      adds  c19af99   gnu: git-annex: Update to 6.20180529.
      adds  d6331fc   gnu: mrrescue: Fix typo in description.
      adds  aa0551c   gnu: bspwm: Update to 0.9.5.
      adds  d4cf038   gnu: inxi-minimal: Update to 3.0.12-1.
      adds  cac85e8   gnu: r-xfun: Update to 0.2.
      adds  6917161   gnu: emacs-with-editor: Update to 2.7.3.
      adds  de99ba7   Fix some more lonely unquotes.
      adds  5a368b2   gnu: emacs-ghub: Update to 2.0.1.
      adds  f6fefe1   gnu: guile-emacs: Return #t from phases.
      adds  d78f1fd   gnu: emacs-magit-popup: Return #t from phases.
      adds  67cf588   gnu: emacs-ghub: Return #t from phases.
      adds  ff6275f   gnu: haskell-mode: Use INVOKE.
      adds  93adf92   gnu: emacs-w3m: Return #t from phases.
      adds  f9299da   gnu: emacs-ag: Return #t from phases.
      adds  8bc1967   gnu: emacs-graphviz-dot-mode: Return #t from phases.
      adds  32a8a6b   gnu: emacs-mmm-mode: Return #t from phases.
      adds  d2f3817   gnu: emacs-pdf-tools: Return #t from phases.
      adds  e76d959   gnu: emacs-slime: Use INVOKE.
      adds  e97ad01   gnu: emacs-ivy: Return #t from phases.
      adds  2f48416   gnu: emacs-ess: Return #t from phases.
      adds  bca4b2e   gnu: emacs-xelb: Return #t from phases.
      adds  d4c68d3   gnu: emacs-m-buffer-el: Return #t from phases.
      adds  cd0750f   gnu: memcached: Update to 1.5.8.
      adds  0430eb6   gnu: r-prroc: Update to 1.3.1.
      adds  a86049d   gnu: Add r-pls.
      adds  3321234   gnu: r-recipes: Update to 0.1.3.
      adds  80683c1   gnu: emacs-htmlize: Update to 1.53.
      adds  aa86a56   gnu: emacs-d-mode: Update to 2.0.9.
      adds  59e8a57   gnu: pioneers: Update to 15.5.
      adds  50e1d36   gnu: fizmo: Update to 0.8.5.
      adds  6ad191b   gnu: fizmo: Update home page.
      adds  1b91569   gnu: quakespasm: Update to 0.93.1.
      adds  101460d   gnu: extremetuxracer: Update to 0.7.5.
      adds  5bc0ac9   gnu: extremetuxracer: Fix typo in synopsis.
      adds  de0dfb8   gnu: meandmyshadow: Return #t from phases.
      adds  bdf1fe5   gnu: meandmyshadow: Update to 0.4.1.
      adds  80f7550   gnu: perl-lwp-protocol-https: Update to 6.07.
      adds  661c237   services: boot: Reverse the order of boot expressions.
      adds  76c321d   services: cleanup: Expect file names to be UTF-8-encoded.
      adds  229e4d5   gnu: neofetch: Update to 5.0.0.
      adds  e5b77cc   gnu: guile-sdl2: Install compiled files to the expected 
place.
      adds  00fca59   gnu: Add guile-chickadee.
      adds  acb1c72   gnu: neofetch: Remove dead code.
      adds  7e04f21   gnu: neofetch: Don't use auto-generated tarball.
      adds  780205a   gnu: Add go-github-com-prometheus-node-exporter.
      adds  6a18183   services: Fix GPLv3 header in cuirass and pm modules.
      adds  7427b2c   gnu: Add go-github-com-sirupsen-logrus.
      adds  5cc2b84   gnu: Move go-github-com-kardianos-osext to (gnu packages 
golang).
      adds  aed4944   gnu: Add go-github-com-ayufan-golang-kardianos-service.
      adds  6a8d338   gnu: ocaml: Build reproducibly.
      adds  636bb2b   services: Add description to core services.
      adds  378daa8   services: boot: Take gexps instead of monadic gexps.
      adds  e203f4c   guix system: 'list-generation' correctly displays file 
system labels.
      adds  414ee4e   Update NEWS.
      adds  addda2e   gnu: Add emacs-mu4e-conversation.
      adds  9abf135   gnu: emacs-evil-collection: Update to 20180617.
      adds  1e5fb52   gnu: emacs-evil-ediff: Deprecate in favor of 
emacs-evil-collection.
      adds  5a74886   gnu: emacs-evil-mu4e: Deprecate in favor of 
emacs-evil-collection.
      adds  913f1f1   gnu: emacs-evil: Update to 20180517.
      adds  1e2b2f4   gnu: r-biocviews: Update to 1.48.2.
      adds  eafd35b   gnu: r-optparse: Update to 1.6.0.
      adds  a1c7016   gnu: r-delayedarray: Update to 0.6.1.
      adds  1f73fd0   gnu: r-complexheatmap: Update to 1.18.1.
      adds  9de9dcd   gnu: r-progress: Update to 1.2.0.
      adds  92b8a48   gnu: r-mice: Update to 3.1.0.
      adds  58630da   gnu: r-mgcv: Update to 1.8-24.
      adds  1a50321   gnu: r-httpuv: Update to 1.4.4.1.
      adds  a34801c   gnu: youtube-dl: Update to 2018.06.19.
       new  4dfea10   Merge branch 'master' into staging

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 NEWS                                               |  26 ++-
 gnu/local.mk                                       |   4 +-
 gnu/packages/admin.scm                             |  38 +---
 gnu/packages/bioinformatics.scm                    |  16 +-
 gnu/packages/cran.scm                              |  60 +++++-
 gnu/packages/databases.scm                         |   4 +-
 gnu/packages/emacs.scm                             | 231 ++++++++++-----------
 gnu/packages/game-development.scm                  |  40 +++-
 gnu/packages/games.scm                             | 111 ++++++++--
 gnu/packages/gnome.scm                             |  16 +-
 gnu/packages/golang.scm                            |  89 ++++++++
 gnu/packages/java.scm                              |   2 +-
 gnu/packages/maven.scm                             |   4 +-
 gnu/packages/monitoring.scm                        |  26 +++
 gnu/packages/networking.scm                        |   2 +-
 gnu/packages/ocaml.scm                             |   3 +-
 gnu/packages/patches/libyaml-CVE-2014-9130.patch   |  30 ---
 .../patches/mrrescue-support-love-11.patch         | 213 +++++++++++++++++++
 .../ocaml-enable-ocamldoc-reproducibility.patch    | 149 +++++++++++++
 gnu/packages/patches/x265-fix-ppc64le-build.patch  |  25 +++
 gnu/packages/sdl.scm                               |  12 +-
 gnu/packages/statistics.scm                        |   4 +-
 gnu/packages/syncthing.scm                         |  28 ---
 gnu/packages/version-control.scm                   |   5 +-
 gnu/packages/video.scm                             |  10 +-
 gnu/packages/web.scm                               |  18 +-
 gnu/packages/wm.scm                                |  17 +-
 gnu/services.scm                                   | 213 +++++++++++--------
 gnu/services/cuirass.scm                           |   2 +-
 gnu/services/pm.scm                                |   2 +-
 gnu/services/shepherd.scm                          |  40 ++--
 gnu/system.scm                                     |   9 +-
 gnu/tests/base.scm                                 |  70 +++++++
 guix/scripts/system.scm                            |  24 ++-
 34 files changed, 1137 insertions(+), 406 deletions(-)
 delete mode 100644 gnu/packages/patches/libyaml-CVE-2014-9130.patch
 create mode 100644 gnu/packages/patches/mrrescue-support-love-11.patch
 create mode 100644 
gnu/packages/patches/ocaml-enable-ocamldoc-reproducibility.patch
 create mode 100644 gnu/packages/patches/x265-fix-ppc64le-build.patch